RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TRBV20-1A0A075B6N2 111 aa12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 GLRXP35754 106 aa12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 ATP5IP56385 69 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 PPP1R27Q86WC6 154 aa12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 LINC00312Q9Y6C7 94 aa12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 WT1P19544 449 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-201ENST00000261897 PRR33A8MZF0 331 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 TRGV9Q99603 122 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 KLF12Q9Y4X4 402 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 MUC3AQ02505 3323 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 MT-ATP8P03928 68 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 MC5RP33032 325 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 C3orf56Q8N813 242 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 SPANXB1Q9NS25 103 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
PRPF40B-201ENST00000261897 CRIP1P50238 77 aa12.58□□□□□ -0.39
PRPF40B-201ENST00000261897 FOXI2Q6ZQN5 318 aa12.58□□□□□ -0.39
PRPF40B-201ENST00000261897 TDHQ8IZJ6 230 aa12.58□□□□□ -0.39
PRPF40B-201ENST00000261897 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 A0A096LNJ9 63 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 ZNF815PA8K554 130 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 RNF182Q8N6D2 247 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 MRAP2Q96G30 205 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.4
PRPF40B-201ENST00000261897 PRRG2O14669 202 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 RAX2Q96IS3 184 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 CEP295Q9C0D2 2601 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 F5H697 171 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 F8W1H4 67 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 POU2AF1Q16633 256 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 ZNF71Q9NQZ8 489 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 ATRXP46100 2492 aa12.57□□□□□ -0.4
PRPF40B-201ENST00000261897 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
PRPF40B-201ENST00000261897 UBALD2Q8IYN6 164 aa12.56□□□□□ -0.4
PRPF40B-201ENST00000261897 MDS2Q8NDY4 140 aa12.56□□□□□ -0.4
PRPF40B-201ENST00000261897 Q6AWC8 147 aa12.56□□□□□ -0.4
PRPF40B-201ENST00000261897 CEP192Q8TEP8 1941 aa12.56□□□□□ -0.4
PRPF40B-201ENST00000261897 RNF183Q96D59 192 aa12.56□□□□□ -0.4
PRPF40B-201ENST00000261897 TRAV17A0A0B4J275 112 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 SLC25A15Q9Y619 301 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 VSTM5A8MXK1 200 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 SIGLEC9Q9Y336 463 aa12.55□□□□□ -0.4
PRPF40B-201ENST00000261897 ODF1Q14990 250 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 THAP8Q8NA92 274 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 KLHL30-AS1Q8NEE0 82 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 A0A1B0GW15 77 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 MYCNOSP40205 109 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 TM4SF5O14894 197 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 GATA3P23771 443 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 TEX29Q8N6K0 151 aa12.54□□□□□ -0.4
PRPF40B-201ENST00000261897 FAM90A27PA6NNH2 459 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 IGKV1-17P01599 117 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 ZFP2Q6ZN57 461 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 TTC32Q5I0X7 151 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 ZNF833PQ6ZTB9 187 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 WNK1Q9H4A3 2382 aa12.53□□□□□ -0.4
PRPF40B-201ENST00000261897 ATP5LO75964 103 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 PRSS2P07478 247 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 CGB3P0DN86 165 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 CGB7P0DN87 165 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 ZNF474Q6S9Z5 364 aaPredicted RBP12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 C8orf86Q6ZUL3 223 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 NXT2Q9NPJ8 142 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 KIR2DL4Q99706 377 aa12.52□□□□□ -0.4
PRPF40B-201ENST00000261897 LY6HO94772 140 aa12.52□□□□□ -0.41
PRPF40B-201ENST00000261897 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
PRPF40B-201ENST00000261897 IGHV4-39P01824 125 aa12.52□□□□□ -0.41
PRPF40B-201ENST00000261897 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-201ENST00000261897 RRN3P1Q2M238 152 aa12.52□□□□□ -0.41
PRPF40B-201ENST00000261897 ZNF48Q96MX3 618 aaPredicted RBP12.52□□□□□ -0.41
PRPF40B-201ENST00000261897 FABP5P3A8MUU1 101 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 TRGV3P03979 118 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 SLC25A16P16260 332 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 A0A1W2PNU3 283 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 TIMM23O14925 209 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 PRR25Q96S07 402 aa12.51□□□□□ -0.41
PRPF40B-201ENST00000261897 SIVA1O15304 175 aa12.5□□□□□ -0.41
PRPF40B-201ENST00000261897 C22orf34Q6ZV56 151 aa12.5□□□□□ -0.41
PRPF40B-201ENST00000261897 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
PRPF40B-201ENST00000261897 A6NJY4 79 aa12.5□□□□□ -0.41
PRPF40B-201ENST00000261897 DLX6P56179 175 aa12.5□□□□□ -0.41
PRPF40B-201ENST00000261897 IL17RELQ6ZVW7 336 aa12.5□□□□□ -0.41
PRPF40B-201ENST00000261897 SNCGO76070 127 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms