RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KIR3DS1Q14943 382 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 LMO1P25800 156 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 RSPO1Q2MKA7 263 aaPredicted RBP14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 MST1LQ2TV78 715 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 C1orf194Q5T5A4 169 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 LY6G5BQ8NDX9 201 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 LYL1P12980 280 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 ZNRF2Q8NHG8 242 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 PLXND1Q9Y4D7 1925 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 NXPH4O95158 308 aa14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 CEACAM8P31997 349 aaPredicted RBP14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 PFN1P07737 140 aaKnown RBP14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 C1orf147Q96MC9 270 aaPredicted RBP14.91□□□□□ -0.02
SMARCC1-201ENST00000254480 TRBV19A0A075B6N1 114 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 CDK2AP2O75956 126 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 ZNF726P1Q15940 193 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 SPRNQ5BIV9 151 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 TRPT1Q86TN4 253 aaKnown RBP14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 MYMXA0A1B0GTQ4 84 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 PLA2G2CQ5R387 149 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 DTX1Q86Y01 620 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 DEFB136Q30KP8 78 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 ZGRF1Q86YA3 2104 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 Q8TCH9 128 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 SIGMAR1Q99720 223 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 CHAC1Q9BUX1 264 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 LY96Q9Y6Y9 160 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 GTF3C1Q12789 2109 aa14.9□□□□□ -0.02
SMARCC1-201ENST00000254480 F6UB75 175 aa14.89□□□□□ -0.03
SMARCC1-201ENST00000254480 ZNF114Q8NC26 417 aa14.89□□□□□ -0.03
SMARCC1-201ENST00000254480 PRSS33Q8NF86 280 aa14.89□□□□□ -0.03
SMARCC1-201ENST00000254480 J3QKU1 62 aa14.89□□□□□ -0.03
SMARCC1-201ENST00000254480 TMEM75Q8N9X5 138 aa14.89□□□□□ -0.03
SMARCC1-201ENST00000254480 ZNF664Q8N3J9 261 aa14.89□□□□□ -0.03
SMARCC1-201ENST00000254480 IGFL3Q6UXB1 125 aa14.88□□□□□ -0.03
SMARCC1-201ENST00000254480 C17orf77Q96MU5 243 aa14.88□□□□□ -0.03
SMARCC1-201ENST00000254480 PDE6HQ13956 83 aa14.88□□□□□ -0.03
SMARCC1-201ENST00000254480 PLCE1Q9P212 2302 aa14.88□□□□□ -0.03
SMARCC1-201ENST00000254480 MGAMO43451 1857 aa14.88□□□□□ -0.03
SMARCC1-201ENST00000254480 C15orf65H3BRN8 121 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 ZNF561-AS1K7EIQ3 104 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 FRMPD3Q5JV73 1810 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 CREBBPQ92793 2442 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 PMVKQ15126 192 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 C2orf66Q6UXQ4 117 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 ZFHX2Q9C0A1 2572 aaPredicted RBP14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 GATA3P23771 443 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 GAGE2AQ6NT46 116 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 SRSF8Q9BRL6 282 aaKnown RBP14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 YPEL3P61236 119 aaPredicted RBP14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 NRGNQ92686 78 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 IGHV1OR15-1A0A075B7D0 117 aa14.87□□□□□ -0.03
SMARCC1-201ENST00000254480 C9JAW5 83 aa14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 F8WEM9 126 aa14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 LURAP1LQ8IV03 231 aa14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 LINC01549A6NIU2 74 aa14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 IGHV4-59P01825 116 aa14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 IGLV2-23P01705 113 aa14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 MRPL27Q9P0M9 148 aaKnown RBP14.86□□□□□ -0.03
SMARCC1-201ENST00000254480 C22orf46C9J442 243 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 FNDC10F2Z333 226 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 LGALS1P09382 135 aaKnown RBP14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 MRPL51Q4U2R6 128 aaKnown RBP14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 ANAPC10Q9UM13 185 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 ATRXP46100 2492 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 C18orf32Q8TCD1 76 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 TRBV25-1A0A075B6N4 114 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 CGB3P0DN86 165 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 IGF2BP2-AS1Q96M15 143 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 SDHAF1A6NFY7 115 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 SLAQ13239 276 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 NOTCH4Q99466 2003 aa14.85□□□□□ -0.03
SMARCC1-201ENST00000254480 A0A0J9YY99 117 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 DEFB112Q30KQ8 113 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 GAGE2EQ4V326 116 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 GAGE2DQ9UEU5 116 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 KIAA1671Q9BY89 1806 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 CDKN1BP46527 198 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 FAM104BQ5XKR9 115 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 DLX4Q92988 240 aaPredicted RBP14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 IGLV1-44P01699 117 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 ZC2HC1AQ96GY0 325 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 PRR25Q96S07 402 aa14.84□□□□□ -0.03
SMARCC1-201ENST00000254480 GTSF1LQ9H1H1 148 aa14.83□□□□□ -0.04
SMARCC1-201ENST00000254480 NDUFS6O75380 124 aaKnown RBP14.83□□□□□ -0.04
SMARCC1-201ENST00000254480 GFRA4Q9GZZ7 299 aa14.83□□□□□ -0.04
SMARCC1-201ENST00000254480 PRSS46E5RG02 174 aa14.83□□□□□ -0.04
SMARCC1-201ENST00000254480 I3L3M4 83 aa14.83□□□□□ -0.04
SMARCC1-201ENST00000254480 ETV2O00321 342 aaPredicted RBP14.83□□□□□ -0.04
SMARCC1-201ENST00000254480 H3BRN7 92 aa14.82□□□□□ -0.04
SMARCC1-201ENST00000254480 GAGE2BQ13066 116 aa14.82□□□□□ -0.04
SMARCC1-201ENST00000254480 CTSZQ9UBR2 303 aa14.82□□□□□ -0.04
SMARCC1-201ENST00000254480 WIPF3A6NGB9 483 aa14.82□□□□□ -0.04
SMARCC1-201ENST00000254480 NDUFA4O00483 81 aa14.82□□□□□ -0.04
SMARCC1-201ENST00000254480 LINC01559Q495D7 138 aa14.82□□□□□ -0.04
SMARCC1-201ENST00000254480 HLA-DRB4P13762 266 aa14.81□□□□□ -0.04
SMARCC1-201ENST00000254480 TCF15Q12870 199 aa14.81□□□□□ -0.04
SMARCC1-201ENST00000254480 HLA-DRB4X5D2U9 266 aa14.81□□□□□ -0.04
SMARCC1-201ENST00000254480 HOXB4P17483 251 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms