RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MRPL53Q96EL3 112 aaKnown RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 METTL26Q96S19 204 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 PEMTQ9UBM1 199 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 RBAKDNA6NC62 111 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 D6R8Y8 96 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SLC25A16P16260 332 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 LEPP41159 167 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 Q8N8P6 123 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ABHD17AQ96GS6 310 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 MCRIP2Q9BUT9 160 aaKnown RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 LAGE3Q14657 143 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 ODF1Q14990 250 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM155Q4W5P6 130 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM200BQ69YZ2 307 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 OR11H6Q8NGC7 330 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 Q96MF0 132 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 FOXC2Q99958 501 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 CHAC1Q9BUX1 264 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 TRBV20-1A0A075B6N2 111 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 PPIAL4CA0A0B4J2A2 164 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 IGKV1-16P04430 117 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 SCGB1C2P0DMR2 95 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 PPIAL4GP0DN37 164 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 CCL8P80075 99 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 CD300EQ496F6 205 aaPredicted RBP3.29□□□□□ -1.88
UBE4A-201ENST00000252108 DUX4L9Q6RFH8 374 aaPredicted RBP3.29□□□□□ -1.88
UBE4A-201ENST00000252108 LYZL1Q6UWQ5 148 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 CNTRLQ7Z7A1 2325 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 AMN1Q8IY45 258 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 SRRM4A7MD48 611 aaKnown RBP3.29□□□□□ -1.88
UBE4A-201ENST00000252108 G3V4G9 280 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 H7C1H1 209 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 WT1-ASQ06250 92 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 CELSR2Q9HCU4 2923 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 IGKV1D-37A0A075B6S9 117 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 M0R1W7 72 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 SH2D1AO60880 128 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 ARMS2P0C7Q2 107 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 EVI2AP22794 236 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 MINOS1Q5TGZ0 78 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 RUSC1-AS1Q66K80 236 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 EEF1AKMT3Q96AZ1 226 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 MINOS1-NBL1R4GNA1 71 aa3.29□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM238C9JI98 176 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 COX6CP09669 75 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF841Q6ZN19 808 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 OR10J6PQ8NGY7 276 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 ATP6V0E2Q8NHE4 81 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 NEU4Q8WWR8 484 aaPredicted RBP3.28□□□□□ -1.88
UBE4A-201ENST00000252108 DLX4Q92988 240 aaPredicted RBP3.28□□□□□ -1.88
UBE4A-201ENST00000252108 UFC1Q9Y3C8 167 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 LENEPQ9Y5L5 61 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 NBPF19A0A087WUL8 3843 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 IGHV1-3A0A0C4DH29 117 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 NPIPB5A8MRT5 1133 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 LINC01619G3V211 115 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM95Q3KNT9 176 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 PATE2Q6UY27 113 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 PRSS33Q8NF86 280 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 ATP6V0BQ99437 205 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF688P0C7X2 276 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 IFI27P40305 119 aaPredicted RBP3.28□□□□□ -1.88
UBE4A-201ENST00000252108 NBL1P41271 181 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 NHP2Q9NX24 153 aaKnown RBP3.28□□□□□ -1.88
UBE4A-201ENST00000252108 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 TMSB15BA0A087X1C1 80 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 RNASE1P07998 156 aaKnown RBP3.28□□□□□ -1.88
UBE4A-201ENST00000252108 CCL3L1P16619 93 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 U3KQK5 164 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 DLX1P56177 255 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 MRPL51Q4U2R6 128 aaKnown RBP3.28□□□□□ -1.88
UBE4A-201ENST00000252108 CEND1Q8N111 149 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 SYT8Q8NBV8 401 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 SCGB3A1Q96QR1 104 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 FBXL15Q9H469 300 aa3.28□□□□□ -1.88
UBE4A-201ENST00000252108 BUB1B-PAK6H3BSN5 160 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 OVOL1O14753 267 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 TMEM160Q9NX00 188 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 MRPL16Q9NX20 251 aaKnown RBP3.27□□□□□ -1.89
UBE4A-201ENST00000252108 HILPDAQ9Y5L2 63 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 LY6LH3BQJ8 138 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 ASIPP42127 132 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 TM4SF20Q53R12 229 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 ADAMTSL5Q6ZMM2 481 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 GTSF1Q8WW33 167 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 RNASE6Q93091 150 aaKnown RBP3.27□□□□□ -1.89
UBE4A-201ENST00000252108 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 C20orf78Q9BR46 151 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 ARFGEF3Q5TH69 2177 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 TRAV12-1A0A0B4J245 112 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 TRAV21A0A0B4J279 112 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 E7EUB6 86 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 STHQ8IWL8 128 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 RNF183Q96D59 192 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 SPANXCQ9NY87 97 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 CACNA1DQ01668 2161 aa3.27□□□□□ -1.89
UBE4A-201ENST00000252108 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms