RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TSC2P49815 1807 aa6.07□□□□□ -1.44
RIF1-201ENST00000243326 CACNG8Q8WXS5 425 aa6.07□□□□□ -1.44
RIF1-201ENST00000243326 H7C1H1 209 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 B9A039 149 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 VDAC2P45880 294 aaPredicted RBP6.06□□□□□ -1.44
RIF1-201ENST00000243326 MUC6Q6W4X9 2439 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 IGHV2-26A0A0B4J1V2 119 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 A0A1W2PPM0 123 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 TOMM40O96008 361 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 ATP6V0BQ99437 205 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 KIAA1671Q9BY89 1806 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 K7EP34 96 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 MRPS16Q9Y3D3 137 aaKnown RBP6.06□□□□□ -1.44
RIF1-201ENST00000243326 TCF20Q9UGU0 1960 aaKnown RBP6.06□□□□□ -1.44
RIF1-201ENST00000243326 PLNP26678 52 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 TM4SF5O14894 197 aa6.06□□□□□ -1.44
RIF1-201ENST00000243326 IGHV4-4A0A075B6R2 117 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 Q6AWC8 147 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 A0A096LPF7 62 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 B3GALT5-AS1P59052 145 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 PAX8Q06710 450 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 PVRIGQ6DKI7 326 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 WIPF2Q8TF74 440 aaPredicted RBP6.05□□□□□ -1.44
RIF1-201ENST00000243326 PRADC1Q9BSG0 188 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 EML5Q05BV3 1969 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 INS-IGF2F8WCM5 200 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 INSP01308 110 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 PFN2P35080 140 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 ITGB1BP1O14713 200 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 SRSF7Q16629 238 aaKnown RBP eCLIP6.05□□□□□ -1.44
RIF1-201ENST00000243326 SPINK13Q1W4C9 94 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 WDR86Q86TI4 376 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 NPYP01303 97 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 COPS9Q8WXC6 57 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 PLXNA3P51805 1871 aa6.05□□□□□ -1.44
RIF1-201ENST00000243326 Q6ZR03 302 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 TEX48A0A1B0GUV7 120 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 TIMM21Q9BVV7 248 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 PAPPA-AS1Q5QFB9 102 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 NDUFB8O95169 186 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 A0A1W2PPI3 338 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 G3V318 75 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 NCKAP5O14513 1909 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 TRAV41A0A0B4J266 112 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 CRPP02741 224 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 FAM120AOSQ5T036 256 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 FGF6P10767 208 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 SLC25A48Q6ZT89 311 aaKnown RBP6.04□□□□□ -1.44
RIF1-201ENST00000243326 AKAP13Q12802 2813 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 TEX36Q5VZQ5 186 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 F6UB75 175 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 IGHV1-8P0DP01 117 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 TEX43Q6ZNM6 134 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 Q0VG73 95 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 PROK2Q9HC23 129 aa6.04□□□□□ -1.44
RIF1-201ENST00000243326 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.04□□□□□ -1.44
RIF1-201ENST00000243326 C1orf147Q96MC9 270 aaPredicted RBP6.03□□□□□ -1.44
RIF1-201ENST00000243326 SIGLEC9Q9Y336 463 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 WFDC2Q14508 124 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 Q8NFD4 153 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 TMEM238C9JI98 176 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 VOPP1Q96AW1 172 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 RPL39LQ96EH5 51 aaKnown RBP6.03□□□□□ -1.44
RIF1-201ENST00000243326 RITA1Q96K30 269 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 PAX1P15863 534 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 XCL2Q9UBD3 114 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 A0A1B0GWJ7 208 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 NDUFS7O75251 213 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 SRRM5B3KS81 715 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 NXPH4O95158 308 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 HOXD3P31249 432 aaPredicted RBP6.03□□□□□ -1.44
RIF1-201ENST00000243326 MRPL52Q86TS9 123 aaKnown RBP6.03□□□□□ -1.44
RIF1-201ENST00000243326 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 JPT2Q9H910 190 aa6.03□□□□□ -1.44
RIF1-201ENST00000243326 IFI6P09912 130 aa6.02□□□□□ -1.44
RIF1-201ENST00000243326 DAND5Q8N907 189 aa6.02□□□□□ -1.44
RIF1-201ENST00000243326 RLFQ13129 1914 aa6.02□□□□□ -1.44
RIF1-201ENST00000243326 IGLC7A0M8Q6 106 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 TICRRQ7Z2Z1 1910 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 COX8AP10176 69 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 DENND4AQ7Z401 1863 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 CEND1Q8N111 149 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 PIEZO2Q9H5I5 2752 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 YAE1D1Q9NRH1 226 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 IGLV3-32A0A0A0MS00 114 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 MYMXA0A1B0GTQ4 84 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 ZNF134P52741 427 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.02□□□□□ -1.45
RIF1-201ENST00000243326 IGKV2-29A2NJV5 120 aaPredicted RBP6.02□□□□□ -1.45
RIF1-201ENST00000243326 BUB1B-PAK6H3BSN5 160 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 GNRH2O43555 120 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 ZNF672Q499Z4 452 aaPredicted RBP6.02□□□□□ -1.45
RIF1-201ENST00000243326 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
RIF1-201ENST00000243326 RSPO1Q2MKA7 263 aaPredicted RBP6.01□□□□□ -1.45
RIF1-201ENST00000243326 PRIMA1Q86XR5 153 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 FASNP49327 2511 aaKnown RBP6.01□□□□□ -1.45
RIF1-201ENST00000243326 DEFB1P60022 68 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms