RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 IGHV3OR16-8A0A075B7F1 116 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 A0A087WW49 117 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 A0A087X0K7 114 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 ZNF320A2RRD8 509 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 UBE2CO00762 179 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
HOXC6-201ENST00000243108 PSG9Q00887 426 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 C1orf194Q5T5A4 169 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 GOLT1AQ6ZVE7 132 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 Q86TA4 180 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
HOXC6-201ENST00000243108 ARL3P36405 182 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 SGK494Q96LW2 274 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 AAMDCQ9H7C9 122 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 A0A0G2JLM5 398 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 DIRC3C9JPN6 131 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 METTL26Q96S19 204 aa13.13□□□□□ -0.31
HOXC6-201ENST00000243108 SMIM27A0A1W2PRY6 76 aa13.12□□□□□ -0.31
HOXC6-201ENST00000243108 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
HOXC6-201ENST00000243108 TMEM183AQ8IXX5 376 aa13.12□□□□□ -0.31
HOXC6-201ENST00000243108 B9D2Q9BPU9 175 aa13.12□□□□□ -0.31
HOXC6-201ENST00000243108 ZNF492Q9P255 531 aa13.12□□□□□ -0.31
HOXC6-201ENST00000243108 TRAV8-1A0A0A6YYK1 113 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 SERTM2A0A1B0GWG4 89 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 LINC01619G3V211 115 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 K7EQM0 130 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 M0R3E3 92 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 NDUFA4O00483 81 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 TRBV12-3P01733 135 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
HOXC6-201ENST00000243108 HUWE1Q7Z6Z7 4374 aaKnown RBP13.11□□□□□ -0.31
HOXC6-201ENST00000243108 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
HOXC6-201ENST00000243108 OVOL1O14753 267 aa13.1□□□□□ -0.31
HOXC6-201ENST00000243108 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
HOXC6-201ENST00000243108 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
HOXC6-201ENST00000243108 PSG3Q16557 428 aa13.1□□□□□ -0.31
HOXC6-201ENST00000243108 ZNF331Q9NQX6 463 aaPredicted RBP13.1□□□□□ -0.31
HOXC6-201ENST00000243108 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
HOXC6-201ENST00000243108 C19orf71A6NCJ1 209 aa13.1□□□□□ -0.31
HOXC6-201ENST00000243108 ZFP30Q9Y2G7 519 aa13.1□□□□□ -0.31
HOXC6-201ENST00000243108 APOHP02749 345 aaPredicted RBP13.09□□□□□ -0.31
HOXC6-201ENST00000243108 CSN1S1P47710 185 aa13.09□□□□□ -0.31
HOXC6-201ENST00000243108 FAM209BQ5JX69 171 aa13.09□□□□□ -0.31
HOXC6-201ENST00000243108 PRR27Q6MZM9 219 aa13.09□□□□□ -0.31
HOXC6-201ENST00000243108 PRNTQ86SH4 94 aa13.09□□□□□ -0.31
HOXC6-201ENST00000243108 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
HOXC6-201ENST00000243108 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
HOXC6-201ENST00000243108 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
HOXC6-201ENST00000243108 KMT2CQ8NEZ4 4911 aaKnown RBP13.09□□□□□ -0.31
HOXC6-201ENST00000243108 HOXA5P20719 270 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 NDUFA6P56556 154 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 LINC00322Q6ZN03 302 aaPredicted RBP13.08□□□□□ -0.32
HOXC6-201ENST00000243108 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
HOXC6-201ENST00000243108 ZNF785A8K8V0 405 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 SAP30O75446 220 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 MEOX2P50222 304 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 INSL3P51460 131 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 CT83Q5H943 113 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 C16orf54Q6UWD8 224 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 UNQ9165/PRO28630Q6UXU0 137 aa13.08□□□□□ -0.32
HOXC6-201ENST00000243108 FBLL1A6NHQ2 334 aaKnown RBP13.07□□□□□ -0.32
HOXC6-201ENST00000243108 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
HOXC6-201ENST00000243108 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
HOXC6-201ENST00000243108 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
HOXC6-201ENST00000243108 RPL19P84098 196 aaKnown RBP13.07□□□□□ -0.32
HOXC6-201ENST00000243108 GLMPQ8WWB7 406 aa13.07□□□□□ -0.32
HOXC6-201ENST00000243108 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
HOXC6-201ENST00000243108 TRAPPC1Q9Y5R8 145 aa13.07□□□□□ -0.32
HOXC6-201ENST00000243108 IGHV3-66A0A0C4DH42 116 aa13.06□□□□□ -0.32
HOXC6-201ENST00000243108 TSKUQ8WUA8 353 aa13.06□□□□□ -0.32
HOXC6-201ENST00000243108 RPP21Q9H633 154 aaKnown RBP13.06□□□□□ -0.32
HOXC6-201ENST00000243108 STAB2Q8WWQ8 2551 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 CHEK1O14757 476 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 TCL1AP56279 114 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 P01737 135 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 AKR1D1P51857 326 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 COX19Q49B96 90 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 GBGT1Q8N5D6 347 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 GNB1LQ9BYB4 327 aa13.05□□□□□ -0.32
HOXC6-201ENST00000243108 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
HOXC6-201ENST00000243108 NBEAL2Q6ZNJ1 2754 aa13.04□□□□□ -0.32
HOXC6-201ENST00000243108 IGHV3-49A0A0A0MS15 119 aa13.04□□□□□ -0.32
HOXC6-201ENST00000243108 HLA-DMBP28068 263 aa13.04□□□□□ -0.32
HOXC6-201ENST00000243108 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
HOXC6-201ENST00000243108 OR4B1Q8NGF8 309 aa13.04□□□□□ -0.32
HOXC6-201ENST00000243108 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
HOXC6-201ENST00000243108 A8MWL6 223 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
HOXC6-201ENST00000243108 FRMD6-AS1P0C7T7 363 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 CBLN1P23435 193 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms