RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 CCL13Q99616 98 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 HIGD1AQ9Y241 93 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 M0R3E3 92 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 EVI2AP22794 236 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 PTH2Q96A98 100 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 U3KQK5 164 aa12.42□□□□□ -0.42
DDX1-201ENST00000233084 MSMPQ1L6U9 139 aa12.41□□□□□ -0.42
DDX1-201ENST00000233084 C5orf64Q2M2E5 130 aa12.41□□□□□ -0.42
DDX1-201ENST00000233084 KLF17Q5JT82 389 aaPredicted RBP12.41□□□□□ -0.42
DDX1-201ENST00000233084 Q6ZUT4 128 aa12.41□□□□□ -0.42
DDX1-201ENST00000233084 C1orf162Q8NEQ5 155 aaPredicted RBP12.4□□□□□ -0.42
DDX1-201ENST00000233084 ANAPC13Q9BS18 74 aa12.4□□□□□ -0.42
DDX1-201ENST00000233084 IGKV3-15P01624 115 aa12.4□□□□□ -0.42
DDX1-201ENST00000233084 C1QTNF4Q9BXJ3 329 aa12.4□□□□□ -0.42
DDX1-201ENST00000233084 SLC25A39Q9BZJ4 359 aaPredicted RBP12.4□□□□□ -0.42
DDX1-201ENST00000233084 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
DDX1-201ENST00000233084 B5MCH6 92 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 Q6AWC8 147 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 RITA1Q96K30 269 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 VKORC1Q9BQB6 163 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 ERG28Q9UKR5 140 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 DPM2O94777 84 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 KLRD1Q13241 179 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 TRGV9Q99603 122 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 MSRB1Q9NZV6 116 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 RALYQ9UKM9 306 aaKnown RBP12.39□□□□□ -0.43
DDX1-201ENST00000233084 IGHV3-72A0A0B4J1Y9 119 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 LINC01548A6NM66 108 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
DDX1-201ENST00000233084 TMEM167AQ8TBQ9 72 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 TMEM133Q9H2Q1 129 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
DDX1-201ENST00000233084 HIVEP3Q5T1R4 2406 aa12.38□□□□□ -0.43
DDX1-201ENST00000233084 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
DDX1-201ENST00000233084 MBNL2Q5VZF2 373 aaKnown RBP12.38□□□□□ -0.43
DDX1-201ENST00000233084 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
DDX1-201ENST00000233084 ENSAO43768 121 aaKnown RBP12.38□□□□□ -0.43
DDX1-201ENST00000233084 RBP4P02753 201 aa12.38□□□□□ -0.43
DDX1-201ENST00000233084 GATA1P15976 413 aaPredicted RBP12.38□□□□□ -0.43
DDX1-201ENST00000233084 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
DDX1-201ENST00000233084 PIFOQ8TCI5 191 aa12.38□□□□□ -0.43
DDX1-201ENST00000233084 MAP1LC3AQ9H492 121 aa12.38□□□□□ -0.43
DDX1-201ENST00000233084 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 CCL3L1P16619 93 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 HOXB4P17483 251 aaPredicted RBP12.37□□□□□ -0.43
DDX1-201ENST00000233084 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 TMEM75Q8N9X5 138 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 OR4C13Q8NGP0 309 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 TMEM158Q8WZ71 300 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 CSMD1Q96PZ7 3565 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 LOC107984156A0A0G2JMH3 177 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 NDUFA3O95167 84 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 PSMB2P49721 201 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 SHISA2Q6UWI4 295 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 ZNF833PQ6ZTB9 187 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 ARL17AQ8IVW1 177 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 OR11H1Q8NG94 326 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 OR11H2Q8NH07 326 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 UFC1Q9Y3C8 167 aa12.37□□□□□ -0.43
DDX1-201ENST00000233084 SH2D1AO60880 128 aa12.36□□□□□ -0.43
DDX1-201ENST00000233084 IGHV1-18A0A0C4DH31 117 aa12.36□□□□□ -0.43
DDX1-201ENST00000233084 TRBV19A0A075B6N1 114 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 FAM27E3Q08E93 113 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDX1-201ENST00000233084 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
DDX1-201ENST00000233084 GAFA1Q96PS6 74 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
DDX1-201ENST00000233084 RAI1Q7Z5J4 1906 aaPredicted RBP12.35□□□□□ -0.43
DDX1-201ENST00000233084 TGFAP01135 160 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 CRYGCP07315 174 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 SLC25A15Q9Y619 301 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 CCL21O00585 134 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
DDX1-201ENST00000233084 LHBP01229 141 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 IGLV2-23P01705 113 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 SIGLEC15Q6ZMC9 328 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 ZFP2Q6ZN57 461 aa12.34□□□□□ -0.43
DDX1-201ENST00000233084 C22orf34Q6ZV56 151 aa12.33□□□□□ -0.44
DDX1-201ENST00000233084 RPEQ96AT9 228 aa12.33□□□□□ -0.44
DDX1-201ENST00000233084 TNFRSF6BO95407 300 aa12.33□□□□□ -0.44
DDX1-201ENST00000233084 IL4P05112 153 aa12.33□□□□□ -0.44
DDX1-201ENST00000233084 GAGE5Q13069 117 aa12.33□□□□□ -0.44
DDX1-201ENST00000233084 GAGE6Q13070 117 aa12.33□□□□□ -0.44
DDX1-201ENST00000233084 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 IGLV1-44P01699 117 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
DDX1-201ENST00000233084 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
DDX1-201ENST00000233084 KIR2DL4Q99706 377 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 NCBP2LA6PVI3 153 aaKnown RBP12.32□□□□□ -0.44
DDX1-201ENST00000233084 VSTM5A8MXK1 200 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 ADORA2A-AS1P86434 159 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 Q8TAT8 98 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms