RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 IGHV1OR15-1A0A075B7D0 117 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 CCL24O00175 119 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 PFN1P07737 140 aaKnown RBP14.66□□□□□ -0.06
CLIP2-201ENST00000223398 CDKN1BP46527 198 aa14.65□□□□□ -0.06
CLIP2-201ENST00000223398 ZMAT4Q9H898 229 aa14.65□□□□□ -0.06
CLIP2-201ENST00000223398 IGHV7-4-1A0A0J9YVY3 117 aa14.65□□□□□ -0.06
CLIP2-201ENST00000223398 TTC32Q5I0X7 151 aa14.65□□□□□ -0.06
CLIP2-201ENST00000223398 OR2K2Q8NGT1 345 aa14.65□□□□□ -0.06
CLIP2-201ENST00000223398 ACACBO00763 2458 aa14.65□□□□□ -0.06
CLIP2-201ENST00000223398 HOXD3P31249 432 aaPredicted RBP14.64□□□□□ -0.07
CLIP2-201ENST00000223398 A0A1B0GV90 55 aa14.64□□□□□ -0.07
CLIP2-201ENST00000223398 C21orf62-AS1Q17RA5 79 aa14.64□□□□□ -0.07
CLIP2-201ENST00000223398 ANXA2RQ3ZCQ2 193 aa14.64□□□□□ -0.07
CLIP2-201ENST00000223398 FAM90A2PQ658T7 463 aa14.64□□□□□ -0.07
CLIP2-201ENST00000223398 HAPLN4Q86UW8 402 aa14.64□□□□□ -0.07
CLIP2-201ENST00000223398 BLCAPP62952 87 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 C1orf194Q5T5A4 169 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 TMEM75Q8N9X5 138 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 TRPT1Q86TN4 253 aaKnown RBP14.63□□□□□ -0.07
CLIP2-201ENST00000223398 OTOGLQ3ZCN5 2332 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 CENPVL3A0A0U1RRI6 287 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 M0R2P5 195 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 ZNRF2Q8NHG8 242 aa14.63□□□□□ -0.07
CLIP2-201ENST00000223398 TRBV24-1A0A075B6N3 115 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 LINC01549A6NIU2 74 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 C10orf105Q8TEF2 133 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 TMEM242Q9NWH2 141 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 PLA2G5P39877 138 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 SLURP1P55000 103 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 ZNF625Q96I27 306 aaPredicted RBP14.62□□□□□ -0.07
CLIP2-201ENST00000223398 F6UB75 175 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 H3BRN7 92 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 SPG11Q96JI7 2443 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 CGB3P0DN86 165 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 CFPP27918 469 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 SEM1Q6ZVN7 128 aa14.62□□□□□ -0.07
CLIP2-201ENST00000223398 A0A1B0GW64 132 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 SEC11AP67812 179 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 LAMTOR2Q9Y2Q5 125 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 TNFRSF6BO95407 300 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 LYL1P12980 280 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 LY96Q9Y6Y9 160 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 GAGE6Q13070 117 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 TMEM256Q8N2U0 113 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 IGF2BP2-AS1Q96M15 143 aa14.61□□□□□ -0.07
CLIP2-201ENST00000223398 GHRHP01286 108 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 PRIMA1Q86XR5 153 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 C10orf126Q8N4M7 172 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 CYYR1Q96J86 154 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 TRBV25-1A0A075B6N4 114 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 TRAV26-2A0A0B4J265 109 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 TMEM238C9JI98 176 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 INS-IGF2F8WCM5 200 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 ZNF561-AS1K7EIQ3 104 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 ASPHD1Q5U4P2 390 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 PLEKHB2Q96CS7 222 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 FNDC4Q9H6D8 234 aaPredicted RBP14.6□□□□□ -0.07
CLIP2-201ENST00000223398 SMPXQ9UHP9 88 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 ADAMTS9Q9P2N4 1935 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 IGLC1P0CG04 106 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 RHODO00212 210 aa14.6□□□□□ -0.07
CLIP2-201ENST00000223398 GGTLC3B5MD39 225 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 IGLV2-23P01705 113 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 A0A0J9YY99 117 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 IGLV3-1P01715 115 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 RASL11AQ6T310 242 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 LURAP1LQ8IV03 231 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 HIST1H2BLQ99880 126 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 MED13Q9UHV7 2174 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 C5orf30Q96GV9 206 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 DENND4CQ5VZ89 1909 aa14.59□□□□□ -0.07
CLIP2-201ENST00000223398 HLA-DMBP28068 263 aa14.58□□□□□ -0.07
CLIP2-201ENST00000223398 APRG1Q8IVJ8 170 aa14.58□□□□□ -0.07
CLIP2-201ENST00000223398 SPRY4Q9C004 299 aa14.58□□□□□ -0.07
CLIP2-201ENST00000223398 FGF23Q9GZV9 251 aaPredicted RBP14.58□□□□□ -0.07
CLIP2-201ENST00000223398 hDV102S1A0JD36 115 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 Q8NA96 180 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 LY6G5BQ8NDX9 201 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 NEGR1Q7Z3B1 354 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 TIMM21Q9BVV7 248 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 ANAPC10Q9UM13 185 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 TP53TG1Q9Y2A0 90 aa14.58□□□□□ -0.08
CLIP2-201ENST00000223398 LGALS1P09382 135 aaKnown RBP14.57□□□□□ -0.08
CLIP2-201ENST00000223398 PRR25Q96S07 402 aa14.57□□□□□ -0.08
CLIP2-201ENST00000223398 OR11H6Q8NGC7 330 aa14.57□□□□□ -0.08
CLIP2-201ENST00000223398 ERG28Q9UKR5 140 aa14.57□□□□□ -0.08
CLIP2-201ENST00000223398 LHBP01229 141 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 COLCA2A8K830 154 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 CLPSL2Q6UWE3 100 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 C17orf77Q96MU5 243 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 A8MWV9 139 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 VWC2LB2RUY7 222 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 GSN-AS1Q9NRJ2 163 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 GUSBP1Q15486 140 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 RITA1Q96K30 269 aa14.56□□□□□ -0.08
CLIP2-201ENST00000223398 NAA38Q9BRA0 125 aaKnown RBP14.56□□□□□ -0.08
CLIP2-201ENST00000223398 NOP10Q9NPE3 64 aaKnown RBP14.56□□□□□ -0.08
CLIP2-201ENST00000223398 TRAV8-2A0A0B4J237 113 aa14.55□□□□□ -0.08
CLIP2-201ENST00000223398 LINC00587B1AMM8 73 aa14.55□□□□□ -0.08
CLIP2-201ENST00000223398 ORAOV1Q8WV07 137 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms