RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 MDS2Q8NDY4 140 aa13.74□□□□□ -0.21
ITGB4-201ENST00000200181 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
ITGB4-201ENST00000200181 CFHR4Q92496 578 aa13.73□□□□□ -0.21
ITGB4-201ENST00000200181 RBBP6Q7Z6E9 1792 aaKnown RBP13.73□□□□□ -0.21
ITGB4-201ENST00000200181 PRB2P02812 416 aaPredicted RBP13.73□□□□□ -0.21
ITGB4-201ENST00000200181 ORMDL1Q9P0S3 153 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 TMEM14CQ9P0S9 112 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 CACNA1IQ9P0X4 2223 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 ANGP03950 147 aaKnown RBP13.72□□□□□ -0.21
ITGB4-201ENST00000200181 TEX36Q5VZQ5 186 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 IGKV1-6A0A0C4DH72 117 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 ASPHD1Q5U4P2 390 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 FOXL2NBQ6ZUU3 175 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 APOC4P55056 127 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 RNASE13Q5GAN3 156 aaKnown RBP13.72□□□□□ -0.21
ITGB4-201ENST00000200181 C22orf46C9J442 243 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 DEFB105AQ8NG35 78 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 PYGO2Q9BRQ0 406 aa13.72□□□□□ -0.21
ITGB4-201ENST00000200181 E7EQL1 145 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 G3V318 75 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 NDUFA4O00483 81 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 B3GALT5-AS1P59052 145 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 CLPSL2Q6UWE3 100 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 ZNF833PQ6ZTB9 187 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 BOD1L2Q8IYS8 172 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 MSMBP08118 114 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 A0A096LPF7 62 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 BAALC-AS2P0C853 105 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 GBF1Q92538 1859 aa13.71□□□□□ -0.21
ITGB4-201ENST00000200181 CHKB-CPT1BH3BT56 60 aa13.71□□□□□ -0.22
ITGB4-201ENST00000200181 NDUFS7O75251 213 aa13.71□□□□□ -0.22
ITGB4-201ENST00000200181 IGKV1-39P01597 117 aa13.71□□□□□ -0.22
ITGB4-201ENST00000200181 IGKV1D-39P04432 117 aa13.71□□□□□ -0.22
ITGB4-201ENST00000200181 ZC2HC1AQ96GY0 325 aa13.71□□□□□ -0.22
ITGB4-201ENST00000200181 C20orf78Q9BR46 151 aa13.71□□□□□ -0.22
ITGB4-201ENST00000200181 ZNF134P52741 427 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 DKK2Q9UBU2 259 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 MYOFQ9NZM1 2061 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 GATA3P23771 443 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 GATA4P43694 442 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 CCL25O15444 150 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
ITGB4-201ENST00000200181 CFC1BP0CG36 223 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 CFC1P0CG37 223 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 IGF2BP2-AS1Q96M15 143 aa13.7□□□□□ -0.22
ITGB4-201ENST00000200181 UBE2BP63146 152 aa13.69□□□□□ -0.22
ITGB4-201ENST00000200181 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
ITGB4-201ENST00000200181 IGHV1-69P01742 117 aa13.69□□□□□ -0.22
ITGB4-201ENST00000200181 IGHG2P01859 326 aa13.69□□□□□ -0.22
ITGB4-201ENST00000200181 RNF223E7ERA6 249 aa13.69□□□□□ -0.22
ITGB4-201ENST00000200181 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
ITGB4-201ENST00000200181 Q6ZVH6 145 aa13.68□□□□□ -0.22
ITGB4-201ENST00000200181 COL4A5P29400 1685 aa13.68□□□□□ -0.22
ITGB4-201ENST00000200181 AHCTF1Q8WYP5 2266 aa13.68□□□□□ -0.22
ITGB4-201ENST00000200181 IGHV2-5P01817 119 aa13.68□□□□□ -0.22
ITGB4-201ENST00000200181 NDUFC2O95298 119 aa13.67□□□□□ -0.22
ITGB4-201ENST00000200181 SMIM20Q8N5G0 67 aa13.67□□□□□ -0.22
ITGB4-201ENST00000200181 ACYP1P07311 99 aa13.67□□□□□ -0.22
ITGB4-201ENST00000200181 KIF26BQ2KJY2 2108 aa13.67□□□□□ -0.22
ITGB4-201ENST00000200181 PSME4Q14997 1843 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 MPDZO75970 2070 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 VOPP1Q96AW1 172 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 F6UB75 175 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 WFDC9Q8NEX5 89 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 CHD5Q8TDI0 1954 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 XCL1P47992 114 aa13.66□□□□□ -0.22
ITGB4-201ENST00000200181 LMO1P25800 156 aa13.65□□□□□ -0.22
ITGB4-201ENST00000200181 Q9H8V8 135 aa13.65□□□□□ -0.22
ITGB4-201ENST00000200181 Q8TCH9 128 aa13.65□□□□□ -0.23
ITGB4-201ENST00000200181 MRPL53Q96EL3 112 aaKnown RBP13.65□□□□□ -0.23
ITGB4-201ENST00000200181 CACNA1DQ01668 2161 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 COL4A1P02462 1669 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 IGHV2-70DA0A0C4DH43 119 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 FUSP35637 526 aaKnown RBP eCLIP13.64□□□□□ -0.23
ITGB4-201ENST00000200181 POLR2AP24928 1970 aaKnown RBP13.64□□□□□ -0.23
ITGB4-201ENST00000200181 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 LRRK1Q38SD2 2015 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 IGLC7A0M8Q6 106 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 FXYD5Q96DB9 178 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 UBR3Q6ZT12 1888 aa13.64□□□□□ -0.23
ITGB4-201ENST00000200181 IGKV2D-24A0A075B6R9 120 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 K7EM74 188 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 RHOHQ15669 191 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 C17orf58Q2M2W7 97 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 IGKV1OR2-108A0A075B7D4 117 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 C10orf91Q5T1B1 145 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 KLF2Q9Y5W3 355 aaPredicted RBP13.63□□□□□ -0.23
ITGB4-201ENST00000200181 C17orf82Q86X59 251 aaPredicted RBP13.63□□□□□ -0.23
ITGB4-201ENST00000200181 ALPK2Q86TB3 2170 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 IGHV4-4A0A075B6R2 117 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 IGHV7-4-1A0A0J9YVY3 117 aa13.63□□□□□ -0.23
ITGB4-201ENST00000200181 HERV-K104P63124 156 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 TNS1Q9HBL0 1735 aaKnown RBP13.62□□□□□ -0.23
ITGB4-201ENST00000200181 FAM186AA6NE01 2351 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 ZNF493Q6ZR52 646 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 SH2D6Q7Z4S9 175 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 LTAP01374 205 aa13.62□□□□□ -0.23
ITGB4-201ENST00000200181 Q6ZS92 163 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms