RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
MRPL28-201ENST00000199706 TMED6Q8WW62 240 aa12.46□□□□□ -0.41
MRPL28-201ENST00000199706 RAB24Q969Q5 203 aa12.46□□□□□ -0.41
MRPL28-201ENST00000199706 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.41
MRPL28-201ENST00000199706 SH3BGRL3Q9H299 93 aa12.46□□□□□ -0.41
MRPL28-201ENST00000199706 LYRM9A8MSI8 78 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 ARL14EPLP0DKL9 152 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 FAM74A1Q5RGS3 127 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 Q6ZTC4 211 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 ACTR3CQ9C0K3 210 aaPredicted RBP12.45□□□□□ -0.42
MRPL28-201ENST00000199706 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
MRPL28-201ENST00000199706 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
MRPL28-201ENST00000199706 A0A0D9SG52 128 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 FAM222AQ5U5X8 452 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
MRPL28-201ENST00000199706 LINC01587Q99440 93 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 PYGO2Q9BRQ0 406 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 LINC00467Q9BRT7 94 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 ZNF492Q9P255 531 aa12.44□□□□□ -0.42
MRPL28-201ENST00000199706 IGKV2-40A0A087WW87 121 aaPredicted RBP12.43□□□□□ -0.42
MRPL28-201ENST00000199706 PLAC8L1A1L4L8 177 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 CXorf1O96002 111 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 IGKV2D-40P01614 121 aaPredicted RBP12.43□□□□□ -0.42
MRPL28-201ENST00000199706 ZNF138P52744 262 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 Q6ZNX1 250 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 RNASE8Q8TDE3 154 aaKnown RBP12.43□□□□□ -0.42
MRPL28-201ENST00000199706 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 TMEM167BQ9NRX6 74 aa12.43□□□□□ -0.42
MRPL28-201ENST00000199706 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 SERTM2A0A1B0GWG4 89 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 C7orf71A4D174 169 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
MRPL28-201ENST00000199706 DIRC3C9JPN6 131 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 SMLR1H3BR10 107 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 GCHFRP30047 84 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 OR11H4Q8NGC9 324 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 ST6GAL2Q96JF0 529 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 VGLL1Q99990 258 aa12.42□□□□□ -0.42
MRPL28-201ENST00000199706 PRB4P10163 310 aaPredicted RBP12.41□□□□□ -0.42
MRPL28-201ENST00000199706 EMP1P54849 157 aa12.41□□□□□ -0.42
MRPL28-201ENST00000199706 ERCC8Q13216 396 aa12.41□□□□□ -0.42
MRPL28-201ENST00000199706 KIR3DS1Q14943 382 aa12.41□□□□□ -0.42
MRPL28-201ENST00000199706 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
MRPL28-201ENST00000199706 CMTM2Q8TAZ6 248 aa12.41□□□□□ -0.42
MRPL28-201ENST00000199706 DEFB131BA0A096LNP1 70 aa12.4□□□□□ -0.42
MRPL28-201ENST00000199706 BCL2L11O43521 198 aa12.4□□□□□ -0.42
MRPL28-201ENST00000199706 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.42
MRPL28-201ENST00000199706 TRAV12-3A0A0B4J271 114 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 PGPA6NDG6 321 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 HMGB3O15347 200 aaKnown RBP12.39□□□□□ -0.43
MRPL28-201ENST00000199706 ZNF324O75467 553 aaPredicted RBP12.39□□□□□ -0.43
MRPL28-201ENST00000199706 GPX1P07203 203 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 AZU1P20160 251 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
MRPL28-201ENST00000199706 LGALS9CQ6DKI2 356 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 CCDC28AQ8IWP9 274 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 C5orf17Q8NAS9 161 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
MRPL28-201ENST00000199706 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
MRPL28-201ENST00000199706 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
MRPL28-201ENST00000199706 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
MRPL28-201ENST00000199706 UMAD1C9J7I0 102 aa12.38□□□□□ -0.43
MRPL28-201ENST00000199706 EIF3GO75821 320 aaKnown RBP eCLIP12.38□□□□□ -0.43
MRPL28-201ENST00000199706 ZNF726P1Q15940 193 aa12.38□□□□□ -0.43
MRPL28-201ENST00000199706 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
MRPL28-201ENST00000199706 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
MRPL28-201ENST00000199706 DAD1P61803 113 aa12.37□□□□□ -0.43
MRPL28-201ENST00000199706 CD300CQ08708 224 aa12.37□□□□□ -0.43
MRPL28-201ENST00000199706 SSX7Q7RTT5 188 aa12.37□□□□□ -0.43
MRPL28-201ENST00000199706 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
MRPL28-201ENST00000199706 NKX6-2Q9C056 277 aaPredicted RBP12.37□□□□□ -0.43
MRPL28-201ENST00000199706 APLNQ9ULZ1 77 aa12.37□□□□□ -0.43
MRPL28-201ENST00000199706 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 IGLL5B9A064 214 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 PRM2P04554 102 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 DAZ2Q13117 558 aaKnown RBP12.36□□□□□ -0.43
MRPL28-201ENST00000199706 BTN1A1Q13410 526 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 Q6AWC8 147 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 ZNF767PQ75MW2 155 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
MRPL28-201ENST00000199706 Q8TAT8 98 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 STOML3Q8TAV4 291 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 ARL2-SNX15V9GYD0 113 aa12.36□□□□□ -0.43
MRPL28-201ENST00000199706 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
MRPL28-201ENST00000199706 GGTLC3B5MD39 225 aa12.35□□□□□ -0.43
MRPL28-201ENST00000199706 K7EQM0 130 aa12.35□□□□□ -0.43
MRPL28-201ENST00000199706 TCRAP04437 139 aa12.35□□□□□ -0.43
MRPL28-201ENST00000199706 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
MRPL28-201ENST00000199706 IBA57Q5T440 356 aaKnown RBP12.35□□□□□ -0.43
MRPL28-201ENST00000199706 PRR9Q5T870 116 aa12.35□□□□□ -0.43
MRPL28-201ENST00000199706 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms