RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FOXI2Q6ZQN5 318 aa9.69□□□□□ -0.86
PHGDH-220ENST00000641570 OR4B1Q8NGF8 309 aa9.69□□□□□ -0.86
PHGDH-220ENST00000641570 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
PHGDH-220ENST00000641570 PCNPQ8WW12 178 aaKnown RBP9.69□□□□□ -0.86
PHGDH-220ENST00000641570 FAM110AQ9BQ89 295 aa9.69□□□□□ -0.86
PHGDH-220ENST00000641570 NDFIP1Q9BT67 221 aa9.69□□□□□ -0.86
PHGDH-220ENST00000641570 VAX2Q9UIW0 290 aa9.69□□□□□ -0.86
PHGDH-220ENST00000641570 RBFOX3A6NFN3 312 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 SOCS3O14543 225 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 CD7P09564 240 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 AKR1C3P42330 323 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 CNN1P51911 297 aaKnown RBP9.68□□□□□ -0.86
PHGDH-220ENST00000641570 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 PEA15Q15121 130 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 HIST1H2BAQ96A08 127 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
PHGDH-220ENST00000641570 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
PHGDH-220ENST00000641570 NDUFB4O95168 129 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 NMBP08949 121 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 CEBPGP53567 150 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-220ENST00000641570 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 APRG1Q8IVJ8 170 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 FAM24BQ8N5W8 94 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 CYB561D1Q8N8Q1 229 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 ATG101Q9BSB4 218 aa9.67□□□□□ -0.86
PHGDH-220ENST00000641570 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
PHGDH-220ENST00000641570 ZNF705FA8MVS1 300 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-220ENST00000641570 M0R3E3 92 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 PEX7O00628 323 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 RGS13O14921 159 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 HLA-DMBP28068 263 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 TSPOP30536 169 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 CCL20P78556 96 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 OR8A1Q8NGG7 326 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 SAV1Q9H4B6 383 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-220ENST00000641570 EPDR1Q9UM22 224 aa9.66□□□□□ -0.86
PHGDH-220ENST00000641570 LOC102723971A0A1B0GUV8 181 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 DIRC3C9JPN6 131 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 S100A9P06702 114 aaKnown RBP9.65□□□□□ -0.86
PHGDH-220ENST00000641570 ATP5G3P48201 142 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 APOC4P55056 127 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 GNG5P63218 68 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 IFITM2Q01629 132 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 C20orf173Q96LM9 149 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 TREM1Q9NP99 234 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
PHGDH-220ENST00000641570 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-220ENST00000641570 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-220ENST00000641570 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-220ENST00000641570 TCRAP04437 139 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
PHGDH-220ENST00000641570 LEPP41159 167 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 PMS2P11Q13670 270 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
PHGDH-220ENST00000641570 TRRAPQ9Y4A5 3859 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 A0A0J9YX75 114 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 F6UB75 175 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 ZNF506Q5JVG8 444 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 MORN3Q6PF18 240 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-220ENST00000641570 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
PHGDH-220ENST00000641570 SCO2A0A1W2PP80 73 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 AMBPP02760 352 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 IGHV4-30-4P0DP06 118 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 ZNF138P52744 262 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 ZNF674Q2M3X9 581 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 KPRPQ5T749 579 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-220ENST00000641570 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 COMMD7Q86VX2 200 aa9.62□□□□□ -0.87
PHGDH-220ENST00000641570 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-220ENST00000641570 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
PHGDH-220ENST00000641570 TMEM250H0YL14 139 aa9.61□□□□□ -0.87
PHGDH-220ENST00000641570 H3BMM0 161 aa9.61□□□□□ -0.87
PHGDH-220ENST00000641570 ZNF705DP0CH99 300 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-220ENST00000641570 ZNF705BP0CI00 300 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-220ENST00000641570 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-220ENST00000641570 ZNF124Q15973 351 aa9.61□□□□□ -0.87
PHGDH-220ENST00000641570 SAPCD1Q5SSQ6 148 aa9.61□□□□□ -0.87
PHGDH-220ENST00000641570 MRAPQ8TCY5 172 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms