RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
HNRNPU-228ENST00000640306 ZNF747Q9BV97 191 aa12.99□□□□□ -0.33
HNRNPU-228ENST00000640306 NBR2O15453 112 aa12.99□□□□□ -0.33
HNRNPU-228ENST00000640306 C16orf54Q6UWD8 224 aa12.99□□□□□ -0.33
HNRNPU-228ENST00000640306 LY6LH3BQJ8 138 aa12.98□□□□□ -0.33
HNRNPU-228ENST00000640306 C1RLQ9NZP8 487 aa12.98□□□□□ -0.33
HNRNPU-228ENST00000640306 IGHV2-70DA0A0C4DH43 119 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 UQCRFS1P47985 274 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 NDPQ00604 133 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 TMEM189A5PLL7 270 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 SH2D1AO60880 128 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 AMMECR1LQ6DCA0 310 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 SIGLEC8Q9NYZ4 499 aa12.97□□□□□ -0.33
HNRNPU-228ENST00000640306 NPIPB5A8MRT5 1133 aa12.96□□□□□ -0.33
HNRNPU-228ENST00000640306 LINC01545Q5VT33 79 aa12.96□□□□□ -0.33
HNRNPU-228ENST00000640306 DPM3Q9P2X0 92 aa12.96□□□□□ -0.33
HNRNPU-228ENST00000640306 ZFHX3Q15911 3703 aa12.96□□□□□ -0.33
HNRNPU-228ENST00000640306 CSN1S1P47710 185 aa12.96□□□□□ -0.33
HNRNPU-228ENST00000640306 A0A096LNJ9 63 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 PAX2Q02962 417 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 RBX1P62877 108 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 GPR183P32249 361 aa12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 NAA38Q9BRA0 125 aaKnown RBP12.95□□□□□ -0.34
HNRNPU-228ENST00000640306 CACNG7P62955 275 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 DYNAPQ8N1N2 210 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 VGLL1Q99990 258 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 TWIST1Q15672 202 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 C12orf54Q6X4T0 127 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 CFHR4Q92496 578 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
HNRNPU-228ENST00000640306 CELSR1Q9NYQ6 3014 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 IGHV3OR16-13A0A075B7E8 117 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 IGHV3-74A0A0B4J1X5 117 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 IGHV3-66A0A0C4DH42 116 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 WI2-2373I1.2A0A1W2PRP0 233 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 EGR2P11161 476 aaPredicted RBP12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 RHOGP84095 191 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 CDSNQ15517 529 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 F8W735 103 aaPredicted RBP12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 MFAP4P55083 255 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 C2orf91Q6ZV80 131 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 C18orf15Q96N68 181 aa12.93□□□□□ -0.34
HNRNPU-228ENST00000640306 GAS8-AS1O95177 125 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 C21orf62Q9NYP8 219 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 TRAV8-6A0A0B4J262 113 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 PSG9Q00887 426 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 HIST1H1AQ02539 215 aaPredicted RBP12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 ARPC1AQ92747 370 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 NPYP01303 97 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 COX8AP10176 69 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 CKS2P33552 79 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 LYPD1Q8N2G4 141 aa12.92□□□□□ -0.34
HNRNPU-228ENST00000640306 ORM1P02763 201 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 PRSS57Q6UWY2 283 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 ORMDL3Q8N138 153 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 MS4A6AQ9H2W1 248 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 TRAV30A0A087WSZ9 112 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 TRBV6-1A0A0K0K1D8 114 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 ERCC8Q13216 396 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 RNF5Q99942 180 aa12.91□□□□□ -0.34
HNRNPU-228ENST00000640306 PRR25Q96S07 402 aa12.9□□□□□ -0.34
HNRNPU-228ENST00000640306 MAP1AP78559 2803 aaPredicted RBP12.9□□□□□ -0.34
HNRNPU-228ENST00000640306 SPTAN1Q13813 2472 aaKnown RBP12.9□□□□□ -0.34
HNRNPU-228ENST00000640306 COL12A1Q99715 3063 aa12.9□□□□□ -0.34
HNRNPU-228ENST00000640306 RAB1BQ9H0U4 201 aa12.9□□□□□ -0.34
HNRNPU-228ENST00000640306 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 THYN1Q9P016 225 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 C7orf71A4D174 169 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 Q6AWC8 147 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 EVI2AP22794 236 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 NMUP48645 174 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 VKORC1Q9BQB6 163 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 SMAD5-AS1Q9Y6J3 95 aa12.89□□□□□ -0.35
HNRNPU-228ENST00000640306 K7EP13 123 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 NDUFA3O95167 84 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 CEACAM3P40198 252 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 ITPR1Q14643 2758 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 A0A1B0GW15 77 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 CCL21O00585 134 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms