RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 TRBV6-6A0A0A6YYG2 114 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 CRYGBP07316 175 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 TRAV12-2A0A075B6T6 113 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 DSCR9P59020 149 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 C9orf139Q6ZV77 190 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 ZNF581Q9P0T4 197 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 MYO9BQ13459 2157 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 LAMB2P55268 1798 aa8.81□□□□□ -1
KCNMA1-259ENST00000639406 B9A039 149 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 RFPL3SP0C7P2 107 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 CRYGSP22914 178 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 C5orf64Q2M2E5 130 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 LINC01545Q5VT33 79 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 Q6ZS49 121 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 CLPSL1A2RUU4 121 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 BAALCQ8WXS3 180 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 ICOSQ9Y6W8 199 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 TUBGCP6Q96RT7 1819 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 H0YJW9 148 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 NTN3O00634 580 aaPredicted RBP8.8□□□□□ -1
KCNMA1-259ENST00000639406 UQCRQO14949 82 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 DAD1P61803 113 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 C20orf78Q9BR46 151 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 SHANK2-AS3Q9BTD1 123 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 ANKRD36A6QL64 1941 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 SS18Q15532 418 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 MAP1BP46821 2468 aaKnown RBP8.8□□□□□ -1
KCNMA1-259ENST00000639406 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
KCNMA1-259ENST00000639406 DTX2Q86UW9 622 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 VOPP1Q96AW1 172 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 COL5A3P25940 1745 aaPredicted RBP8.79□□□□□ -1
KCNMA1-259ENST00000639406 PIKFYVEQ9Y2I7 2098 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 PDE6HQ13956 83 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 PTH2Q96A98 100 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 SDK1Q7Z5N4 2213 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 CFPP27918 469 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 C11orf52Q96A22 123 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 LINC00205P59089 165 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 C3orf22Q8N5N4 141 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 HIGD1BQ9P298 99 aa8.79□□□□□ -1
KCNMA1-259ENST00000639406 C1orf195Q5TG92 126 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 TRBV19A0A075B6N1 114 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 TIMM23O14925 209 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 PSME4Q14997 1843 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 TRGV1A0A0A0MS02 117 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 TRBV10-2A0A0K0K1G8 114 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 RHODO00212 210 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 IGHV3-53P01767 116 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 IGHV1-2P23083 117 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 HERVK_113P63121 156 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 DTX1Q86Y01 620 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
KCNMA1-259ENST00000639406 TAF1LQ8IZX4 1826 aa8.78□□□□□ -1
KCNMA1-259ENST00000639406 KIAA0100Q14667 2235 aaKnown RBP8.78□□□□□ -1
KCNMA1-259ENST00000639406 C15orf32Q32M92 178 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 SDHAF1A6NFY7 115 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 ZNF831Q5JPB2 1677 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 NDUFC2-KCTD14E9PQ53 114 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 M0QXV9 152 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 PSPNO60542 156 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 DEFB121Q5J5C9 76 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 ZCCHC24Q8N2G6 241 aaKnown RBP8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 C1orf162Q8NEQ5 155 aaPredicted RBP8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 SPANXB1Q9NS25 103 aaPredicted RBP8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 HEATR5BQ9P2D3 2071 aa8.77□□□□□ -1.01
KCNMA1-259ENST00000639406 COLCA1Q6ZS62 124 aa8.76□□□□□ -1.01
KCNMA1-259ENST00000639406 NEU4Q8WWR8 484 aaPredicted RBP8.76□□□□□ -1.01
KCNMA1-259ENST00000639406 FAM168AQ92567 244 aa8.76□□□□□ -1.01
KCNMA1-259ENST00000639406 MYO16Q9Y6X6 1858 aa8.76□□□□□ -1.01
KCNMA1-259ENST00000639406 C5orf63A6NC05 138 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 CRYGCP07315 174 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 Q6P435 159 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 BRCA2P51587 3418 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 SPTBP11277 2137 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 USP34Q70CQ2 3546 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 MRPL14Q6P1L8 145 aaKnown RBP8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 C16orf54Q6UWD8 224 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 SCN2AQ99250 2005 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 NXPH4O95158 308 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 THBDP07204 575 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 C20orf204Q6ZNR8 217 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 A4D1N5 150 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 C17orf100A8MU93 164 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 SPATA12Q7Z6I5 190 aa8.75□□□□□ -1.01
KCNMA1-259ENST00000639406 E9PQ18 207 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 CD177Q8N6Q3 437 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 IGHV1OR15-1A0A075B7D0 117 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 FAM120AOSQ5T036 256 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 LINC00643Q86TS7 51 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 CHKB-CPT1BH3BT56 60 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 DKK1O94907 266 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 LTAP01374 205 aa8.74□□□□□ -1.01
KCNMA1-259ENST00000639406 IGHV1-3A0A0C4DH29 117 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms