RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 OR4K15Q8NH41 348 aa-3.25□□□□□ -2.93
LMBR1-222ENST00000638959 SPCS1Q9Y6A9 102 aa-3.25□□□□□ -2.93
LMBR1-222ENST00000638959 HECW1Q76N89 1606 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 TINCRA0A1B0GVN0 87 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 FAM159BA6NKW6 160 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 SPINK4O60575 86 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 GLRXP35754 106 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 AESQ08117 197 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 ZNHIT3Q15649 155 aaPredicted RBP-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 DEFB135Q30KP9 77 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 C18orf21Q32NC0 220 aaPredicted RBP-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 C22orf39Q6P5X5 142 aa-3.26□□□□□ -2.93
LMBR1-222ENST00000638959 VPS13BQ7Z7G8 4022 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 KIDINS220Q9ULH0 1771 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 TSC2P49815 1807 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 MT1AP04731 61 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 SMIM10L2AP0DMW4 78 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 SMIM10L2BP0DMW5 78 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 TMEM141Q96I45 108 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 YPEL2Q96QA6 119 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 TMEM133Q9H2Q1 129 aa-3.27□□□□□ -2.93
LMBR1-222ENST00000638959 CCDC169A6NNP5 214 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 PYYP10082 97 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 UCHL3P15374 230 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 SPRR1BP22528 89 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 DEFA1P59665 94 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 AP3S2P59780 193 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 HAMPP81172 84 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 SPOPLQ6IQ16 392 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 EIF5AL1Q6IS14 154 aaKnown RBP-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 PPP1R1CQ8WVI7 109 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 C20orf27Q9GZN8 174 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 FXYD6Q9H0Q3 95 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 BET1LQ9NYM9 111 aa-3.28□□□□□ -2.93
LMBR1-222ENST00000638959 DNAH9Q9NYC9 4486 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 IFITM5A6NNB3 132 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 APOC4-APOC2K7ER74 178 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 M0R036 132 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 ELOF1P60002 83 aaKnown RBP-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 RANP62826 216 aaKnown RBP-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 DEFB112Q30KQ8 113 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 VMA21Q3ZAQ7 101 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 C3orf62Q6ZUJ4 267 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 GOLT1AQ6ZVE7 132 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 ANKRD29Q8N6D5 301 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 SLC25A40Q8TBP6 338 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 STAG3L4Q8TBR4 150 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 OR4C12Q96R67 309 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 COMMD3Q9UBI1 195 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 DNHD1Q96M86 4753 aa-3.29□□□□□ -2.94
LMBR1-222ENST00000638959 DLEC1Q9Y238 1755 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 ANKRD11Q6UB99 2663 aaPredicted RBP-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 TRAV12-2A0A075B6T6 113 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 FTCDNL1E5RQL4 147 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 CRYZL1O95825 349 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 ORM1P02763 201 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 SYT1P21579 422 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 RPS20P60866 119 aaKnown RBP-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 DCDP81605 110 aaKnown RBP-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 KRT222Q8N1A0 295 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 PIGXQ8TBF5 258 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 C2orf50Q96LR7 162 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 ENY2Q9NPA8 101 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 BZW2Q9Y6E2 419 aaKnown RBP-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 DNAJC13O75165 2243 aa-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 ANK3Q12955 4377 aaKnown RBP-3.3□□□□□ -2.94
LMBR1-222ENST00000638959 AKAP13Q12802 2813 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 EVPLLA8MZ36 301 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 SNRPD2P62316 118 aaKnown RBP-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 PMAIP1Q13794 54 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 C1orf195Q5TG92 126 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 NPCDR1Q9BY65 106 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 TREM1Q9NP99 234 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 NCOA1Q15788 1441 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 NEO1Q92859 1461 aa-3.31□□□□□ -2.94
LMBR1-222ENST00000638959 CDK12Q9NYV4 1490 aaPredicted RBP-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 TRGV1A0A0A0MS02 117 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 J3QRK9 145 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 RBP1P09455 135 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 HLA-EP13747 358 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 PSMB6P28072 239 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 TAS2R41P59536 307 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 TMED1Q13445 227 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 INSL4Q14641 139 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 IQCJQ1A5X6 159 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 LINC00269Q8N2A0 174 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 CCDC90BQ9GZT6 254 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 C1orf109Q9NX04 203 aa-3.32□□□□□ -2.94
LMBR1-222ENST00000638959 ANK1P16157 1881 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 NUP155O75694 1391 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 LOC107984640A0A0U1RRK4 108 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 TPST1O60507 370 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 CCKP06307 115 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 COX4I1P13073 169 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 TNNC1P63316 161 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 SLAMF1Q13291 335 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 CST9Q5W186 159 aa-3.33□□□□□ -2.94
LMBR1-222ENST00000638959 ZCCHC6Q5VYS8 1495 aaKnown RBP-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 WDR87Q6ZQQ6 2873 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 PLXNB2O15031 1838 aa-3.34□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms