RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 G3V318 75 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 RPL23P62829 140 aaKnown RBP4.37□□□□□ -1.71
CHD2-227ENST00000637572 TOMM20LQ6UXN7 152 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 ATP5L2Q7Z4Y8 100 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 ARL6IP6Q8N6S5 226 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 C5orf56Q8N8D9 126 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 Q8N9W7 124 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 FER1L6-AS1Q8NA97 138 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 ZNF48Q96MX3 618 aaPredicted RBP4.37□□□□□ -1.71
CHD2-227ENST00000637572 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 PRDM13Q9H4Q3 707 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 VSIRQ9H7M9 311 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 TMEM160Q9NX00 188 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 KMT2EQ8IZD2 1858 aa4.37□□□□□ -1.71
CHD2-227ENST00000637572 YLPM1P49750 1951 aaKnown RBP4.37□□□□□ -1.71
CHD2-227ENST00000637572 OR11H12B2RN74 326 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 CD5LO43866 347 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 IGHG2P01859 326 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 PPBPP02775 128 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 LGALS1P09382 135 aaKnown RBP4.36□□□□□ -1.71
CHD2-227ENST00000637572 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 ELOBQ15370 118 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 PSG3Q16557 428 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 TMEM183BQ1AE95 376 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 Q6ZN92 141 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 PGLYRP4Q96LB8 373 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 DUX3Q96PT4 197 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 MAP1LC3CQ9BXW4 147 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 TPSG1Q9NRR2 321 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 EML6Q6ZMW3 1958 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 IGHV3OR16-8A0A075B7F1 116 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 IZUMO1RA6ND01 250 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 M0R2Z0 102 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 HERVK_113P61574 105 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 EBI3Q14213 229 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 PSMG4Q5JS54 123 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 RASL11AQ6T310 242 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 LINC01587Q99440 93 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 NEU1Q99519 415 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 CBY3A6NI87 242 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 H3BRN7 92 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 PCP4P48539 62 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 KRTDAPP60985 99 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
CHD2-227ENST00000637572 KIR2DL4Q99706 377 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 SHANK1Q9Y566 2161 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 IGLV11-55A0A075B6I3 123 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 TRAV5A0A0B4J249 113 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 A6NDX4 124 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 SYNJ2BPP57105 145 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 UBE2E2Q96LR5 201 aa4.36□□□□□ -1.71
CHD2-227ENST00000637572 TNRC6AQ8NDV7 1962 aaKnown RBP4.36□□□□□ -1.71
CHD2-227ENST00000637572 IGLV2-14P01704 120 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 IGLV2-23P01705 113 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 OR5AL1P0C617 328 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 ZNF705AQ6ZN79 300 aaPredicted RBP4.35□□□□□ -1.71
CHD2-227ENST00000637572 SMR3AQ99954 134 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 LSM4Q9Y4Z0 139 aaKnown RBP4.35□□□□□ -1.71
CHD2-227ENST00000637572 KMT2BQ9UMN6 2715 aaPredicted RBP4.35□□□□□ -1.71
CHD2-227ENST00000637572 TRBV19A0A075B6N1 114 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 IGHV3OR16-12A0A075B7B8 117 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 PRSS29PA6NIE9 313 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 H0Y8G0 127 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 EIF3GO75821 320 aaKnown RBP eCLIP4.35□□□□□ -1.71
CHD2-227ENST00000637572 PRSS1P07477 247 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 DLX1P56177 255 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 PLP1P60201 277 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 TCF23Q7RTU1 214 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 TMEM75Q8N9X5 138 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 ARHGAP21Q5T5U3 1957 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 IGHV7-4-1A0A0J9YVY3 117 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
CHD2-227ENST00000637572 PDZD11Q5EBL8 140 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 NCKAP5O14513 1909 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 DYSFO75923 2080 aa4.35□□□□□ -1.71
CHD2-227ENST00000637572 FAM181BA6NEQ2 426 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 CSN3P07498 182 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 P0C879 139 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 MLANAQ16655 118 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 TMEM183AQ8IXX5 376 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 WFDC11Q8NEX6 87 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 ZNF502Q8TBZ5 544 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 EXPH5Q8NEV8 1989 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 I3L2K1 104 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 K7EMT4 169 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 FABP4P15090 132 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 SNRPEP62304 92 aaKnown RBP4.34□□□□□ -1.71
CHD2-227ENST00000637572 GNG5P63218 68 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 ZNF491Q8N8L2 437 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 OR11H1Q8NG94 326 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 OCC1Q8TAD7 63 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 CITED2Q99967 270 aaPredicted RBP4.34□□□□□ -1.71
CHD2-227ENST00000637572 LENEPQ9Y5L5 61 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 INSP01308 110 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 ZNF56Q15929 161 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms