RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	EFNA4	P52798	201 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	APOC4	P55056	127 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	KIR3DS1	Q14943	382 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	IGKV1D-8	A0A087WSZ0	117 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	TNFSF13	O75888	250 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	CD200R1L	Q6Q8B3	271 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	LIME1	Q9H400	295 aa		13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	IGHV1-8	P0DP01	117 aa		13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	MARF1	Q9Y4F3	1742 aa	Known RBP	13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	RPP25L	Q8N5L8	163 aa	Known RBP	13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	TRBV7-1	A0A0A6YYK4	115 aa		13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276		A0A1B0GW15	77 aa		13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	LAIR2	Q6ISS4	152 aa		13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	C9orf47	Q6ZRZ4	202 aa		13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	XIRP1	Q702N8	1843 aa	Known RBP	13.3	□□□□□ -0.28
CACNA1A-238	ENST00000637276	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276		H0Y9J4	135 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	WBP1	Q96G27	269 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	TM2D2	Q9BX73	214 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HLA-DRB4	P13762	266 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	FAM90A1	Q86YD7	464 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HLA-DRB4	X5D2U9	266 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	IGHV4-59	P01825	116 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276		A8MWP6	167 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276		Q6AWC8	147 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	FANCD2OS	Q96PS1	177 aa		13.29	□□□□□ -0.28
CACNA1A-238	ENST00000637276	WIPF3	A6NGB9	483 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BK	O60814	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BJ	P06899	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BO	P23527	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BB	P33778	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BD	P58876	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BC	P62807	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST2H2BE	Q16778	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BH	Q93079	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BN	Q99877	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	HIST1H2BM	Q99879	126 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	C15orf53	Q8NAA6	179 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	NUP35	Q8NFH5	326 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	GREM1	O60565	184 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	ARMS2	P0C7Q2	107 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	FAM120AOS	Q5T036	256 aa		13.28	□□□□□ -0.28
CACNA1A-238	ENST00000637276	YPEL1	O60688	119 aa		13.27	□□□□□ -0.28
CACNA1A-238	ENST00000637276	YPEL2	Q96QA6	119 aa		13.27	□□□□□ -0.28
CACNA1A-238	ENST00000637276	SHISA9	B4DS77	424 aa		13.27	□□□□□ -0.28
CACNA1A-238	ENST00000637276	MST1L	Q2TV78	715 aa		13.27	□□□□□ -0.28
CACNA1A-238	ENST00000637276	STRCP1	A6NGW2	1772 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	CR1L	Q2VPA4	569 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TMEM30B	Q3MIR4	351 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	DOCK4	Q8N1I0	1966 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276		F6UB75	175 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ATP6V0E1	O15342	81 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TEX36	Q5VZQ5	186 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	C5orf38	Q86SI9	138 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	BUB1B-PAK6	H3BSN5	160 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TMEM258	P61165	79 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	HSD52	Q0P140	79 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	FBLIM1	Q8WUP2	373 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TMEM243	Q9BU79	118 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	UBL5	Q9BZL1	73 aa		13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.27	□□□□□ -0.29
CACNA1A-238	ENST00000637276	DENND4A	Q7Z401	1863 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ZNF124	Q15973	351 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	HRCT1	Q6UXD1	115 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	GNB1L	Q9BYB4	327 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGKV1-27	A0A075B6S5	117 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	NRGN	Q92686	78 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276		K7ERJ3	54 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	WDR86	Q86TI4	376 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	GPHB5	Q86YW7	130 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	SPTSSB	Q8NFR3	76 aa		13.26	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TNC	P24821	2201 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TRBV6-7	A0A0A0MS04	114 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGKV4-1	P06312	121 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TMEM178B	H3BS89	294 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ZNF581	Q9P0T4	197 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGLL5	B9A064	214 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	CD177	Q8N6Q3	437 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	RNF138	Q8WVD3	245 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TANC2	Q9HCD6	1990 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276		A0A087WWC5	75 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	ETDC	A0A1B0GVM5	59 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	HIST2H2BD	Q6DRA6	164 aa		13.25	□□□□□ -0.29
CACNA1A-238	ENST00000637276	DSCR9	P59020	149 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	LY6G5B	Q8NDX9	201 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	IGKV1-9	A0A0C4DH69	117 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	PROP1	O75360	226 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	AMTN	Q6UX39	209 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	CRYBA4	P53673	196 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	TSKU	Q8WUA8	353 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	CMC4	P56277	68 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	NEUROG3	Q9Y4Z2	214 aa		13.24	□□□□□ -0.29
CACNA1A-238	ENST00000637276	RIF1	Q5UIP0	2472 aa	Known RBP	13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms