RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 SIPA1L3O60292 1781 aaPredicted RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DIDO1Q9BTC0 2240 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 UHRF1BP1LA0JNW5 1464 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 USP24Q9UPU5 2620 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 RP1P56715 2156 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CHD1O14646 1710 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TRAV12-1A0A0B4J245 112 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 C2orf70A6NJV1 201 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 RFPL4AA6NLU0 287 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 HMSDA8MTL9 139 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 RFPL4AL1F8VTS6 287 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CREBL2O60519 120 aaPredicted RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TIMM17BO60830 172 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 OR2H2O95918 312 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NCR2O95944 276 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 METTL15P1P0C7V9 234 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 EVI2AP22794 236 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SRP14P37108 136 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DSCR4P56555 118 aaPredicted RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DNAJB13P59910 316 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CKS1BP61024 79 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 EIF5AP63241 154 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 Q1T7F1 81 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DEFB113Q30KQ7 82 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CCDC58Q4VC31 144 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 KHDC3LQ587J8 217 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 BPIFA4PQ86YQ2 179 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 OR8I2Q8N0Y5 310 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 LINC00269Q8N2A0 174 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 LINC00471Q8N535 108 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SLC30A7Q8NEW0 376 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 POP5Q969H6 163 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 ADAT1Q9BUB4 502 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NIT2Q9NQR4 276 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NHP2Q9NX24 153 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TAS2R4Q9NYW5 299 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 OR5AC2Q9NZP5 309 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 MED11Q9P086 117 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NAT8BQ9UHF3 227 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 HSPB8Q9UJY1 196 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TRAPPC2LQ9UL33 140 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TIMM9Q9Y5J7 89 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TNRC6AQ8NDV7 1962 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 FREM3P0C091 2139 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TET3O43151 1660 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 ROBO1Q9Y6N7 1651 aa0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 BAZ2BQ9UIF8 2168 aaKnown RBP0.62□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PXDNLA1KZ92 1463 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 A2ML1A8K2U0 1454 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PEAK1Q9H792 1746 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SCRIBQ14160 1630 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SCN3AQ9NY46 2000 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DLEC1Q9Y238 1755 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TRAV1-1A0A0B4J248 108 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 E7EUB6 86 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PFDN1O60925 122 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PITX3O75364 302 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CST7O76096 145 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DPM2O94777 84 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DBIP07108 87 aaKnown RBP0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 ASAH2BP0C7U1 165 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 BAALC-AS2P0C853 105 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 UBBP0CG47 229 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CRYGSP22914 178 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SDC2P34741 201 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SSR2P43308 183 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 FOXA3P55318 350 aaPredicted RBP0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 HIST1H1AQ02539 215 aaPredicted RBP0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NDUFA5Q16718 116 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 ASB16-AS1Q495Z4 193 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 C10orf55Q5SWW7 151 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 C1orf134Q5TEV5 83 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 FAM19A2Q8N3H0 131 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 OR8B3Q8NGG8 313 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 OR4K15Q8NH41 348 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 MBD3L1Q8WWY6 194 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PATE1Q8WXA2 126 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 DNAJC9Q8WXX5 260 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 MCEEQ96PE7 176 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NPCDR1Q9BY65 106 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TMEM138Q9NPI0 162 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 C14orf132Q9NPU4 83 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 NDUFB11Q9NX14 153 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 ERG28Q9UKR5 140 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PAIP2BQ9ULR5 123 aaKnown RBP0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 E9PCH4 1651 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TOPAZ1Q8N9V7 1692 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PCDH15Q96QU1 1955 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SPHKAPQ2M3C7 1700 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 MRC2Q9UBG0 1479 aa0.61□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 ZFYVE16Q7Z3T8 1539 aa0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 PATJQ8NI35 1801 aa0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TRAV13-1A0A0B4J241 112 aa0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 IGKV2-29A2NJV5 120 aaPredicted RBP0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 LINC00587B1AMM8 73 aa0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 SLC25A5P05141 298 aaKnown RBP0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 TRGC1P0CF51 173 aa0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 MAXP61244 160 aa0.6□□□□□ -2.31
NPHP3-ACAD11-202ENST00000632629 CNBPP62633 177 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms