RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 M0R3E3 92 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 OVOL3O00110 214 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 CRXO43186 299 aaPredicted RBP6.31□□□□□ -1.4
GPC3-204ENST00000631057 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 AVPP01185 164 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 ARMS2P0C7Q2 107 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 FAM106CPP0CH98 169 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 ZFP36P26651 326 aaKnown RBP6.31□□□□□ -1.4
GPC3-204ENST00000631057 BATFQ16520 125 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 SAPCD1Q5SSQ6 148 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 Q71RC1 249 aaPredicted RBP6.31□□□□□ -1.4
GPC3-204ENST00000631057 COX8CQ7Z4L0 72 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 ATOH7Q8N100 152 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 FAM110DQ8TAY7 271 aaPredicted RBP6.31□□□□□ -1.4
GPC3-204ENST00000631057 CLEC5AQ9NY25 188 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
GPC3-204ENST00000631057 CACNA1AO00555 2505 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 IGHV7-81A0A0B4J1V7 117 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 OR2T8A6NH00 312 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 M0QZ24 198 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
GPC3-204ENST00000631057 CRIP1P50238 77 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 UBE2E1P51965 193 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 RPS20P60866 119 aaKnown RBP6.3□□□□□ -1.4
GPC3-204ENST00000631057 BCL6BQ8N143 479 aaPredicted RBP6.3□□□□□ -1.4
GPC3-204ENST00000631057 Q8N9W7 124 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 C8orf49Q96NF6 230 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 LPAR2Q9HBW0 351 aa6.3□□□□□ -1.4
GPC3-204ENST00000631057 MRPS16Q9Y3D3 137 aaKnown RBP6.3□□□□□ -1.4
GPC3-204ENST00000631057 OR4C46A6NHA9 309 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 SH2D1AO60880 128 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 IGHV3-23P01764 117 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 CTSGP08311 255 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
GPC3-204ENST00000631057 G0S2P27469 103 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 TSPOP30536 169 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 RAB9AP51151 201 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 EFNA4P52798 201 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 GAGE1Q13065 139 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 KLK9Q2XQG4 91 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 PET117Q6UWS5 81 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 ZNF493Q6ZR52 646 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 MAP1LC3CQ9BXW4 147 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 UBTD1Q9HAC8 227 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 ST20Q9HBF5 79 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 KLK9Q9UKQ9 250 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 LAMTOR2Q9Y2Q5 125 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 CACNA1BQ00975 2339 aa6.29□□□□□ -1.4
GPC3-204ENST00000631057 HSBP1L1C9JCN9 74 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 DLEU1O43261 78 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 BMI1P35226 326 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
GPC3-204ENST00000631057 RELQ04864 619 aaPredicted RBP6.28□□□□□ -1.4
GPC3-204ENST00000631057 MAJINQ3KP22 176 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 UNQ5815/PRO19632Q6UWF5 114 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 SPATA12Q7Z6I5 190 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 Q8N1Y9 231 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 ZNF502Q8TBZ5 544 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 PSMG3-AS1Q96PY0 264 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 ASCL2Q99929 193 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 AKAP6Q13023 2319 aa6.28□□□□□ -1.4
GPC3-204ENST00000631057 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.4
GPC3-204ENST00000631057 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.41
GPC3-204ENST00000631057 A0A087X0K7 114 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 GOSR1O95249 250 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
GPC3-204ENST00000631057 CSN3P07498 182 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 IGLL1P15814 213 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 RHOGP84095 191 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 LY6DQ14210 128 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 LYZL1Q6UWQ5 148 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 LINC00173Q6ZV60 143 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 PRSS3P2Q8NHM4 247 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 PRR25Q96S07 402 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 TMEM208Q9BTX3 173 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 TPPP3Q9BW30 176 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 A0A1W2PPR1 153 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 NDUFS7O75251 213 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 GPR183P32249 361 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 SAA4P35542 130 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 ZNF124Q15973 351 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 ECSCRQ19T08 205 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 C15orf32Q32M92 178 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
GPC3-204ENST00000631057 FAM104BQ5XKR9 115 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 OR10AG1Q8NH19 301 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 AJUBAQ96IF1 538 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 SLC50A1Q9BRV3 221 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 TMEM160Q9NX00 188 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 SMAD5-AS1Q9Y6J3 95 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 U3KQK5 164 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 X6R8D5 127 aa6.27□□□□□ -1.41
GPC3-204ENST00000631057 TMSB15BA0A087X1C1 80 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 NPFFO15130 113 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms