RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, human

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-228	ENST00000629725	TRAV12-3	A0A0B4J271	114 aa		13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	MRPS12	O15235	138 aa	Known RBP	13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	HOXB5	P09067	269 aa		13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	SELENOT	P62341	195 aa		13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	PYGO2	Q9BRQ0	406 aa		13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	SLC50A1	Q9BRV3	221 aa		13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	ARL6	Q9H0F7	186 aa		13.7	□□□□□ -0.22
TARDBP-228	ENST00000629725	PRAC2	D3DTV9	90 aa		13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	SNRPC	P09234	159 aa	Known RBP	13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	S100A5	P33763	92 aa		13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	HAMP	P81172	84 aa		13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	DEDD2	Q8WXF8	326 aa		13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	ARV1	Q9H2C2	271 aa		13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	ICOS	Q9Y6W8	199 aa		13.69	□□□□□ -0.22
TARDBP-228	ENST00000629725	TRAV9-2	A0A087WT02	112 aa		13.68	□□□□□ -0.22
TARDBP-228	ENST00000629725	PATE2	Q6UY27	113 aa		13.68	□□□□□ -0.22
TARDBP-228	ENST00000629725	CCDC160	A6NGH7	325 aa		13.67	□□□□□ -0.22
TARDBP-228	ENST00000629725	PAX4	O43316	350 aa		13.67	□□□□□ -0.22
TARDBP-228	ENST00000629725	ZNF431	Q8TF32	576 aa	Predicted RBP	13.67	□□□□□ -0.22
TARDBP-228	ENST00000629725	GSN-AS1	Q9NRJ2	163 aa		13.67	□□□□□ -0.22
TARDBP-228	ENST00000629725	FUT9	Q9Y231	359 aa		13.67	□□□□□ -0.22
TARDBP-228	ENST00000629725	TRGV1	A0A0A0MS02	117 aa		13.66	□□□□□ -0.22
TARDBP-228	ENST00000629725	ZNF324	O75467	553 aa	Predicted RBP	13.66	□□□□□ -0.22
TARDBP-228	ENST00000629725	CT45A10	P0DMU9	189 aa		13.66	□□□□□ -0.22
TARDBP-228	ENST00000629725	LEP	P41159	167 aa		13.66	□□□□□ -0.22
TARDBP-228	ENST00000629725	ZNF680	Q8NEM1	530 aa		13.66	□□□□□ -0.22
TARDBP-228	ENST00000629725	LY96	Q9Y6Y9	160 aa		13.66	□□□□□ -0.22
TARDBP-228	ENST00000629725	LINC00854	A0A1B0GVQ3	168 aa		13.65	□□□□□ -0.22
TARDBP-228	ENST00000629725	LYPD5	Q6UWN5	251 aa		13.65	□□□□□ -0.22
TARDBP-228	ENST00000629725	LINC00305	Q7Z4B0	112 aa		13.65	□□□□□ -0.22
TARDBP-228	ENST00000629725	BPIFA4P	Q86YQ2	179 aa		13.65	□□□□□ -0.22
TARDBP-228	ENST00000629725	C11orf72	Q8NBR9	251 aa		13.65	□□□□□ -0.22
TARDBP-228	ENST00000629725	ODF3	Q96PU9	254 aa		13.65	□□□□□ -0.22
TARDBP-228	ENST00000629725	SLC17A3	O00476	420 aa		13.64	□□□□□ -0.23
TARDBP-228	ENST00000629725	UBE2M	P61081	183 aa	Known RBP	13.64	□□□□□ -0.23
TARDBP-228	ENST00000629725	RRAS2	P62070	204 aa	Predicted RBP	13.64	□□□□□ -0.23
TARDBP-228	ENST00000629725	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.64	□□□□□ -0.23
TARDBP-228	ENST00000629725	NPVF	Q9HCQ7	196 aa		13.64	□□□□□ -0.23
TARDBP-228	ENST00000629725	MSRB1	Q9NZV6	116 aa		13.64	□□□□□ -0.23
TARDBP-228	ENST00000629725	C9orf170	A2RU37	121 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725		H3BTX0	84 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	ID3	Q02535	119 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	PXDC1	Q5TGL8	231 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	TEPP	Q6URK8	271 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	LINC00467	Q9BRT7	94 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	TMEM70	Q9BUB7	260 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	PSENEN	Q9NZ42	101 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725	PXMP4	Q9Y6I8	212 aa		13.63	□□□□□ -0.23
TARDBP-228	ENST00000629725		K7EP13	123 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725		K7EPK0	472 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	POLR2G	P62487	172 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	SLC38A11	Q08AI6	406 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	SPANXN2	Q5MJ10	180 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	ST6GAL2	Q96JF0	529 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	SRR	Q9GZT4	340 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	PRO0255	Q9UI72	69 aa		13.62	□□□□□ -0.23
TARDBP-228	ENST00000629725	NPIPB6	E9PJ23	425 aa		13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	SPINK4	O60575	86 aa		13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	SLC25A5	P05141	298 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	INPP1	P49441	399 aa		13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	MRPL23	Q16540	153 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	FLVCR2	Q9UPI3	526 aa		13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	KLF12	Q9Y4X4	402 aa		13.61	□□□□□ -0.23
TARDBP-228	ENST00000629725	IGLV5-52	A0A0A0MRZ9	124 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	FNDC10	F2Z333	226 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	GOSR2	O14653	212 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	SSSCA1	O60232	199 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	CCNK	O75909	580 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	NDUFB6	O95139	128 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	IGHV3-53	P01767	116 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	EVI2A	P22794	236 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	CRYBA4	P53673	196 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	SLA	Q13239	276 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	ANXA2R	Q3ZCQ2	193 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	C4orf46	Q504U0	113 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	NEGR1	Q7Z3B1	354 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	EIF4E3	Q8N5X7	224 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	SAT2	Q96F10	170 aa	Predicted RBP	13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	RBM38	Q9H0Z9	239 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	HHLA3	Q9XRX5	114 aa		13.6	□□□□□ -0.23
TARDBP-228	ENST00000629725	C7orf71	A4D174	169 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	NAP1L6	A6NFF2	107 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	PRAF2	O60831	178 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	IGLC2	P0DOY2	106 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	TCL1A	P56279	114 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	BAK1	Q16611	211 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	TRIQK	Q629K1	86 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	ZNF546	Q86UE3	836 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	MGAT4C	Q9UBM8	478 aa		13.59	□□□□□ -0.23
TARDBP-228	ENST00000629725	UBR4	Q5T4S7	5183 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	DNAH8	Q96JB1	4490 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725		H3BQ15	152 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	COX7A2P2	O60397	106 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	OR4E1	P0C645	316 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	METTL15P1	P0C7V9	234 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	MORN5	Q5VZ52	161 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	WFDC10B	Q8IUB3	73 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	OR10P1	Q8NGE3	313 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	TMEM37	Q8WXS4	190 aa		13.58	□□□□□ -0.24
TARDBP-228	ENST00000629725	SMIM8	Q96KF7	97 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms