RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 A0A1W2PPI3 338 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 G3V318 75 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 K7EN84 100 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 IGLV2-23P01705 113 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 IGHG2P01859 326 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 FABP4P15090 132 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 MMDQ15546 238 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 ECSCRQ19T08 205 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 FAM78BQ5VT40 261 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 PDPNQ86YL7 162 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 NHLRC2Q8NBF2 726 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 NABP2Q9BQ15 211 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 HSPB9Q9BQS6 159 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 KLK15Q9H2R5 256 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 XKRY2A2RUG3 117 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 MT-CO2P00403 227 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 IGHV3-11P01762 117 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 APOA2P02652 100 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 FRMD6-AS1P0C7T7 363 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 JOSD1Q15040 202 aaPredicted RBP3.7□□□□□ -1.82
LINC00550-201ENST00000629293 MRGPRG-AS1Q2M3A8 158 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 PVRIGQ6DKI7 326 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 CACNG8Q8WXS5 425 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 ARPC1AQ92747 370 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 HARBI1Q96MB7 349 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 HUWE1Q7Z6Z7 4374 aaKnown RBP3.7□□□□□ -1.82
LINC00550-201ENST00000629293 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 IGHV1-3A0A0C4DH29 117 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 GPX4P36969 197 aaPredicted RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 YPEL3P61236 119 aaPredicted RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 PRSS8Q16651 343 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 LBHQ53QV2 105 aaPredicted RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OR10W1Q8NGF6 305 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OR1N2Q8NGR9 330 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 RNASE8Q8TDE3 154 aaKnown RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 HINT2Q9BX68 163 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 GNB4Q9HAV0 340 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 TMEM167BQ9NRX6 74 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 SACSQ9NZJ4 4579 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OOSP1A8MZH6 123 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 GGTLC3B5MD39 225 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 E7EUB6 86 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 LY6LH3BQJ8 138 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OR10J4P0C629 311 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OR10J1P30954 320 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 RPL8P62917 257 aaKnown RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 PLGLAQ15195 96 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 TGIF2LXQ8IUE1 241 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 THAP8Q8NA92 274 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OR10G8Q8NGN5 311 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 FAM167A-AS1Q96KT0 104 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 MRPL32Q9BYC8 188 aaKnown RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 TECRQ9NZ01 308 aaKnown RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 IL36BQ9NZH7 164 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 A0A1W2PN81 502 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 GZMBP10144 247 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 SELENOTP62341 195 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 WT1-ASQ06250 92 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 GBGT1Q8N5D6 347 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 Q8N9W7 124 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 OR5T1Q8NG75 326 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 VSTM2AQ8TAG5 236 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 TMEM37Q8WXS4 190 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 FLYWCH2Q96CP2 140 aaKnown RBP3.69□□□□□ -1.82
LINC00550-201ENST00000629293 IGF2BP2-AS1Q96M15 143 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 MS4A10Q96PG2 267 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 UHRF2Q96PU4 802 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 PFDN5Q99471 154 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF355PQ9NSJ1 428 aa3.69□□□□□ -1.82
LINC00550-201ENST00000629293 IGKV1D-37A0A075B6S9 117 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 A0A1W2PRE2 83 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 OVOL1O14753 267 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 MOSP00540 346 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 CNN1P51911 297 aaKnown RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 FOXE3Q13461 319 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 PSG5Q15238 335 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 GRAMD2BQ96HH9 432 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 SLC25A2Q9BXI2 301 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 COMMD5Q9GZQ3 224 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 FNDC4Q9H6D8 234 aaPredicted RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 WASHC3Q9Y3C0 194 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 V9GYV3 84 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 GATCO43716 136 aaKnown RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 IGLV2-8P01709 118 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 CRYGBP07316 175 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 C8orf88P0DMB2 117 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 GATA2P23769 480 aaPredicted RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 CNTFRP26992 372 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 TAS2R45P59539 299 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 PKIAP61925 76 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 SSBP2P81877 361 aaPredicted RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 CENPWQ5EE01 88 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 C10orf55Q5SWW7 151 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 MORN5Q5VZ52 161 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 C4orf3Q8WVX3 66 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 DLX4Q92988 240 aaPredicted RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 RNF183Q96D59 192 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 RNF2Q99496 336 aa3.68□□□□□ -1.82
LINC00550-201ENST00000629293 FAM103A1Q9BTL3 118 aaKnown RBP3.68□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF430Q9H8G1 570 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms