RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 FBLL1A6NHQ2 334 aaKnown RBP6.92□□□□□ -1.3
VCL-207ENST00000624354 LOXP28300 417 aaPredicted RBP6.92□□□□□ -1.3
VCL-207ENST00000624354 CCDC144NLQ6NUI1 221 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 IGFL3Q6UXB1 125 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 ADAMTSL5Q6ZMM2 481 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 PRNTQ86SH4 94 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 CIARTQ8N365 385 aaPredicted RBP6.92□□□□□ -1.3
VCL-207ENST00000624354 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 C16orf97H3BN30 126 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 K7EQM0 130 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 HAX1O00165 279 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 IGHV1-8P0DP01 117 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 FGF6P10767 208 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 TMEM155Q4W5P6 130 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 Q6ZS92 163 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 GOLT1AQ6ZVE7 132 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 CTSZQ9UBR2 303 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 USP24Q9UPU5 2620 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 VSTM5A8MXK1 200 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 CSN3P07498 182 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 OR4X2Q8NGF9 303 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 OR9G4Q8NGQ1 327 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 F11RQ9Y624 299 aaKnown RBP6.91□□□□□ -1.3
VCL-207ENST00000624354 A0A1B0GUT8 65 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 DLX6P56179 175 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 BSPH1Q075Z2 132 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 TCTEX1D4Q5JR98 221 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 FAM57AQ8TBR7 257 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 DPF1Q92782 380 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 SLC25A39Q9BZJ4 359 aaPredicted RBP6.91□□□□□ -1.3
VCL-207ENST00000624354 TMEM133Q9H2Q1 129 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 SIGLEC9Q9Y336 463 aa6.91□□□□□ -1.3
VCL-207ENST00000624354 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.3
VCL-207ENST00000624354 SMAD7O15105 426 aaKnown RBP6.9□□□□□ -1.3
VCL-207ENST00000624354 CNTFRP26992 372 aa6.9□□□□□ -1.3
VCL-207ENST00000624354 BOD1L2Q8IYS8 172 aa6.9□□□□□ -1.3
VCL-207ENST00000624354 EXOC3-AS1Q8N2X6 119 aa6.9□□□□□ -1.3
VCL-207ENST00000624354 MRAP2Q96G30 205 aa6.9□□□□□ -1.3
VCL-207ENST00000624354 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.3
VCL-207ENST00000624354 DCHS2Q6V1P9 2916 aa6.9□□□□□ -1.3
VCL-207ENST00000624354 APOHP02749 345 aaPredicted RBP6.9□□□□□ -1.31
VCL-207ENST00000624354 RIGQ13278 110 aa6.9□□□□□ -1.31
VCL-207ENST00000624354 PPP1R27Q86WC6 154 aa6.9□□□□□ -1.31
VCL-207ENST00000624354 SPATA25Q9BR10 227 aa6.9□□□□□ -1.31
VCL-207ENST00000624354 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.31
VCL-207ENST00000624354 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.31
VCL-207ENST00000624354 INSIG2Q9Y5U4 225 aa6.9□□□□□ -1.31
VCL-207ENST00000624354 SIVA1O15304 175 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 CSN1S1P47710 185 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 SRSF12Q8WXF0 261 aaKnown RBP6.89□□□□□ -1.31
VCL-207ENST00000624354 ZNF747Q9BV97 191 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 KAAG1Q9UBP8 84 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 NCR2O95944 276 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 IGLV2-11P01706 119 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 RBP4P02753 201 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 CRYGBP07316 175 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
VCL-207ENST00000624354 DYNLRB1Q9NP97 96 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 RNASE6Q93091 150 aaKnown RBP6.89□□□□□ -1.31
VCL-207ENST00000624354 VGLL1Q99990 258 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 ABCA12Q86UK0 2595 aa6.89□□□□□ -1.31
VCL-207ENST00000624354 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 TEX22C9J3V5 150 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 ARMS2P0C7Q2 107 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 HOXB4P17483 251 aaPredicted RBP6.88□□□□□ -1.31
VCL-207ENST00000624354 FCGR2BP31994 310 aaPredicted RBP6.88□□□□□ -1.31
VCL-207ENST00000624354 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 NGBQ9NPG2 151 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 CREBBPQ92793 2442 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 IGHV1-3A0A0C4DH29 117 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 A0A1B0GW15 77 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 A6NJY4 79 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 PLGLAQ15195 96 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
VCL-207ENST00000624354 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 PRRG2O14669 202 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 TM4SF20Q53R12 229 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 PRR30Q53SZ7 412 aaPredicted RBP6.88□□□□□ -1.31
VCL-207ENST00000624354 TMEM75Q8N9X5 138 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 Q9UFV3 132 aa6.88□□□□□ -1.31
VCL-207ENST00000624354 CCDC168Q8NDH2 2452 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 USP9XQ93008 2570 aaPredicted RBP6.87□□□□□ -1.31
VCL-207ENST00000624354 I3L2K1 104 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 IGLV1-47P01700 117 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 THBDP07204 575 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 WFDC2Q14508 124 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 Q6AWC8 147 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms