RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 RBPMS2Q6ZRY4 209 aaKnown RBP13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 EXOC3-AS1Q8N2X6 119 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 MS4A6AQ9H2W1 248 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 ZNF331Q9NQX6 463 aaPredicted RBP13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 OTORQ9NRC9 128 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 PGPA6NDG6 321 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 CD33P20138 364 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 TFPI2P48307 235 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 IGFL4Q6B9Z1 124 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 WFDC3Q8IUB2 231 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 TMEM61Q8N0U2 210 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 LYPD1Q8N2G4 141 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 C16orf92Q96LL3 132 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 TXNDC17Q9BRA2 123 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 SLC50A1Q9BRV3 221 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 AAMDCQ9H7C9 122 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 CXorf65A6NEN9 183 aa13.41□□□□□ -0.26
PTCHD3-202ENST00000622555 VWFP04275 2813 aa13.4□□□□□ -0.26
PTCHD3-202ENST00000622555 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
PTCHD3-202ENST00000622555 PAFAH1B2P68402 229 aa13.4□□□□□ -0.26
PTCHD3-202ENST00000622555 ISOC2Q96AB3 205 aa13.4□□□□□ -0.26
PTCHD3-202ENST00000622555 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
PTCHD3-202ENST00000622555 NAT8Q9UHE5 227 aa13.4□□□□□ -0.26
PTCHD3-202ENST00000622555 TRAV8-2A0A0B4J237 113 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 SOCS3O14543 225 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 SLC25A5P05141 298 aaKnown RBP13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 RNF182Q8N6D2 247 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 DCANP1Q8TF63 244 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 TRAV25A0A0B4J276 109 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 PDE6DO43924 150 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 HLA-DMBP28068 263 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 TMEM241Q24JQ0 296 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 SAMD13Q5VXD3 122 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 CMTM2Q8TAZ6 248 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 SMIM7Q9BQ49 75 aa13.39□□□□□ -0.27
PTCHD3-202ENST00000622555 IZUMO1RA6ND01 250 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 ISLRO14498 428 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 IGLV1-51P01701 117 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 C9orf66Q5T8R8 295 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 C5orf17Q8NAS9 161 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 PARLQ9H300 379 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 RPH3ALQ9UNE2 315 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 NOTCH3Q9UM47 2321 aa13.38□□□□□ -0.27
PTCHD3-202ENST00000622555 F6UZH7 168 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 K7EQG2 157 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 M0R3E3 92 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 RAB5AP20339 215 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 ID1P41134 155 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 GNG5P63218 68 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 FAM24BQ8N5W8 94 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 WFDC9Q8NEX5 89 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 MCRIP2Q9BUT9 160 aaKnown RBP13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 SORL1Q92673 2214 aa13.37□□□□□ -0.27
PTCHD3-202ENST00000622555 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 INSL3P51460 131 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 OR2K2Q8NGT1 345 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 EPDR1Q9UM22 224 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 TRAV2A0A0B4J234 112 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 PRB4P10163 310 aaPredicted RBP13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 CSN1S1P47710 185 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 RPL23P62829 140 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 LCN12Q6JVE5 192 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 RPUSD4Q96CM3 377 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 C20orf173Q96LM9 149 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 TCEAL7Q9BRU2 100 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 CTDSP1Q9GZU7 261 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 PRELID1Q9Y255 219 aa13.36□□□□□ -0.27
PTCHD3-202ENST00000622555 ZNF705FA8MVS1 300 aaPredicted RBP13.35□□□□□ -0.27
PTCHD3-202ENST00000622555 SNRPD3P62318 126 aaKnown RBP13.35□□□□□ -0.27
PTCHD3-202ENST00000622555 ELOBQ15370 118 aa13.35□□□□□ -0.27
PTCHD3-202ENST00000622555 PSG3Q16557 428 aa13.35□□□□□ -0.27
PTCHD3-202ENST00000622555 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
PTCHD3-202ENST00000622555 PEX7O00628 323 aa13.34□□□□□ -0.27
PTCHD3-202ENST00000622555 ZNF688P0C7X2 276 aa13.34□□□□□ -0.27
PTCHD3-202ENST00000622555 IGLL1P15814 213 aa13.34□□□□□ -0.27
PTCHD3-202ENST00000622555 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
PTCHD3-202ENST00000622555 TCRAP04437 139 aa13.33□□□□□ -0.27
PTCHD3-202ENST00000622555 C11orf52Q96A22 123 aa13.33□□□□□ -0.27
PTCHD3-202ENST00000622555 MRPL53Q96EL3 112 aaKnown RBP13.33□□□□□ -0.27
PTCHD3-202ENST00000622555 ATG101Q9BSB4 218 aa13.33□□□□□ -0.27
PTCHD3-202ENST00000622555 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
PTCHD3-202ENST00000622555 ZNF674Q2M3X9 581 aa13.33□□□□□ -0.28
PTCHD3-202ENST00000622555 PSMG4Q5JS54 123 aa13.33□□□□□ -0.28
PTCHD3-202ENST00000622555 GOLT1AQ6ZVE7 132 aa13.33□□□□□ -0.28
PTCHD3-202ENST00000622555 C1orf196B1AJZ1 125 aa13.32□□□□□ -0.28
PTCHD3-202ENST00000622555 RAB5BP61020 215 aa13.32□□□□□ -0.28
PTCHD3-202ENST00000622555 ZNF256Q9Y2P7 627 aaPredicted RBP13.32□□□□□ -0.28
PTCHD3-202ENST00000622555 PRAC2D3DTV9 90 aa13.31□□□□□ -0.28
PTCHD3-202ENST00000622555 ADIRFQ15847 76 aa13.31□□□□□ -0.28
PTCHD3-202ENST00000622555 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
PTCHD3-202ENST00000622555 C2CD4CQ8TF44 421 aa13.31□□□□□ -0.28
PTCHD3-202ENST00000622555 DERL1Q9BUN8 251 aa13.31□□□□□ -0.28
PTCHD3-202ENST00000622555 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
PTCHD3-202ENST00000622555 IGKV2-40A0A087WW87 121 aaPredicted RBP13.3□□□□□ -0.28
PTCHD3-202ENST00000622555 K7EQM0 130 aa13.3□□□□□ -0.28
PTCHD3-202ENST00000622555 IGKV2D-40P01614 121 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms