RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 ZNF90Q03938 601 aa4.13□□□□□ -1.75
FMR1-217ENST00000620828 ZNF124Q15973 351 aa4.13□□□□□ -1.75
FMR1-217ENST00000620828 RLN2P04090 185 aa4.13□□□□□ -1.75
FMR1-217ENST00000620828 RPL35P42766 123 aaKnown RBP4.13□□□□□ -1.75
FMR1-217ENST00000620828 SUB1P53999 127 aaKnown RBP eCLIP4.13□□□□□ -1.75
FMR1-217ENST00000620828 AMTNQ6UX39 209 aa4.13□□□□□ -1.75
FMR1-217ENST00000620828 KCNRGQ8N5I3 272 aa4.13□□□□□ -1.75
FMR1-217ENST00000620828 GGACTQ9BVM4 153 aa4.13□□□□□ -1.75
FMR1-217ENST00000620828 OR11H12B2RN74 326 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 SCO1O75880 301 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 AKR1C2P52895 323 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 DLK1P80370 383 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 PRR20EP86478 221 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 PRR20CP86479 221 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 PRR20DP86480 221 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 PRR20BP86481 221 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 PRR20AP86496 221 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 SLAQ13239 276 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 Q8NAQ8 132 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 ZNF431Q8TF32 576 aaPredicted RBP4.12□□□□□ -1.75
FMR1-217ENST00000620828 ISOC2Q96AB3 205 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 NUDT15Q9NV35 164 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 X6R8D5 127 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 A0A1B0GV72 72 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 H3BRN7 92 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 C4BPBP20851 252 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 HERV-K104P63124 156 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 COQ8AQ8NI60 647 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 FAM19A4Q96LR4 140 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 INMT-MINDY4F8WBC2 141 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 IFNA17P01571 189 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 FHITP49789 147 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 RND2P52198 227 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 IQCJQ1A5X6 159 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 Q56UQ5 140 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 TMEM144Q7Z5S9 345 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 MUC7Q8TAX7 377 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 NPIPB3Q92617 1050 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 C20orf173Q96LM9 149 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 GATAD1Q8WUU5 269 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 GSKIPQ9P0R6 139 aa4.12□□□□□ -1.75
FMR1-217ENST00000620828 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 P2RY1P47900 373 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 DEFB121Q5J5C9 76 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 CDPF1Q6NVV7 123 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 ZNF705AQ6ZN79 300 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 PSMG3Q9BT73 122 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 IGHV3-35A0A0C4DH35 117 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 COLCA2A8K830 154 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 GNG7O60262 68 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 GYPEP15421 78 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 ORM2P19652 201 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 NKX2-1P43699 371 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 CMC4P56277 68 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 DGAT2L7PQ6IED9 249 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 UBAC2Q8NBM4 344 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 IL17DQ8TAD2 202 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 CIB3Q96Q77 187 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 NEU1Q99519 415 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 HSPB11Q9Y547 144 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 HERC2O95714 4834 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 TGIF2-C20orf24A0A0A6YYL0 155 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 ZNF705FA8MVS1 300 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 ZNF705DP0CH99 300 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 ZNF705BP0CI00 300 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 SCGB1C2P0DMR2 95 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 SCGB1C1Q8TD33 95 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 PARD6GQ9BYG4 376 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 LCE6AA0A183 80 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 MED6O75586 246 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 OPRK1P41145 380 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 GUCA2BQ16661 112 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 TCF24Q7RTU0 167 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 MGST2Q99735 147 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 NMES1Q9C002 83 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 LYRM2Q9NU23 88 aaPredicted RBP4.11□□□□□ -1.75
FMR1-217ENST00000620828 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
FMR1-217ENST00000620828 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 ZNF207O43670 478 aaKnown RBP4.1□□□□□ -1.75
FMR1-217ENST00000620828 POLR2GP62487 172 aaKnown RBP eCLIP4.1□□□□□ -1.75
FMR1-217ENST00000620828 SEC22CQ9BRL7 303 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 IGHV3OR16-8A0A075B7F1 116 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 PLAC8L1A1L4L8 177 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 OR4C46A6NHA9 309 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 TAAR5O14804 337 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 IGLC2P0DOY2 106 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 TMED4Q7Z7H5 227 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 OR51G1Q8NGK1 321 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 RAB40CQ96S21 281 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 SHANK2-AS3Q9BTD1 123 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 SELENOKQ9Y6D0 94 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 IGSF23A1L1A6 192 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 PRAF2O60831 178 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 TAS2R45P59539 299 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 H3BMM0 161 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 CRXO43186 299 aaPredicted RBP4.1□□□□□ -1.75
FMR1-217ENST00000620828 HLA-DRB4P13762 266 aa4.1□□□□□ -1.75
FMR1-217ENST00000620828 SEC61GP60059 68 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms