RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 KLF2Q9Y5W3 355 aaPredicted RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 TMEM101Q96IK0 257 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC00477Q96M19 166 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 CENPVL3A0A0U1RRI6 287 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 A8MXK9 166 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 E9PQ18 207 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 RNF166Q96A37 237 aaPredicted RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 ZNF414Q96IQ9 312 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 TNRC6AQ8NDV7 1962 aaKnown RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 A0A087WWL8 130 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 A0A087WX48 190 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 J3QLI3 93 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TOMM40O96008 361 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 SMG1Q96Q15 3661 aaKnown RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 FOLR2P14207 255 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 PAX9P55771 341 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC00311Q8N616 119 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 OR4C5Q8NGB2 326 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TMEM70Q9BUB7 260 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 VPREB3Q9UKI3 123 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TMEM131Q92545 1883 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC01619G3V211 115 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 M0R143 59 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ARHGAP21Q5T5U3 1957 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 IZUMO1RA6ND01 250 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 FGF16O43320 207 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 FOSL1P15407 271 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 WFDC11Q8NEX6 87 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 MRAP2Q96G30 205 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 KLK9Q9UKQ9 250 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 LHBP01229 141 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 SPATA45Q537H7 98 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 OR11H2Q8NH07 326 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 PSG3Q16557 428 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 LYZL1Q6UWQ5 148 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 BCL6BQ8N143 479 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ZNF843Q8N446 348 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 PHLDA1Q8WV24 401 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 RITA1Q96K30 269 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 FNDC4Q9H6D8 234 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 OSTCQ9NRP0 149 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 ZNF876PQ49A33 203 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 Q6AWC8 147 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC01551Q86U37 167 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 IGHV3-16A0A0C4DH30 117 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 SERF1AO75920 110 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 CFPP27918 469 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 GTF2H5Q6ZYL4 71 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 IGHV3-64A0A075B6Q5 118 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 F6UB75 175 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 NDUFA3O95167 84 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 C14orf144Q96I85 54 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SH2D1AO60880 128 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 MST1LQ2TV78 715 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SOX21Q9Y651 276 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SSBP2P81877 361 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 COTL1Q14019 142 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 DAZAP2Q15038 168 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 NCOR1P1Q9H4R4 102 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 TRBV9A0A0B4J1U6 114 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 HLA-DMBP28068 263 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 VCX2Q9H322 139 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 INSP01308 110 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 SMIM6P0DI80 62 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 TSKUQ8WUA8 353 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 ADMP35318 185 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 FBXL19-AS1Q494R0 122 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 DTX2Q86UW9 622 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 IGLC1P0CG04 106 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 HOXD3P31249 432 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 RELNP78509 3460 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms