RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 DEFB136Q30KP8 78 aa15.04■□□□□ -0
GABPB1-212ENST00000615671 Q86TA4 180 aa15.04■□□□□ -0
GABPB1-212ENST00000615671 C17orf82Q86X59 251 aaPredicted RBP15.04■□□□□ -0
GABPB1-212ENST00000615671 ATP6V0BQ99437 205 aa15.04■□□□□ -0
GABPB1-212ENST00000615671 INTS1Q8N201 2190 aaKnown RBP15.04■□□□□ -0
GABPB1-212ENST00000615671 LY6G5BQ8NDX9 201 aa15.04■□□□□ -0
GABPB1-212ENST00000615671 LINC01551Q86U37 167 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 REG4Q9BYZ8 158 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 LTBP1Q14766 1721 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 GATA3P23771 443 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 C22orf46C9J442 243 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 SHANK2-AS3Q9BTD1 123 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 IGKV2D-24A0A075B6R9 120 aa15.03■□□□□ -0
GABPB1-212ENST00000615671 ANK1P16157 1881 aa15.02■□□□□ -0
GABPB1-212ENST00000615671 ANGP03950 147 aaKnown RBP15.02■□□□□ -0
GABPB1-212ENST00000615671 SEC11AP67812 179 aa15.02■□□□□ -0
GABPB1-212ENST00000615671 NMSQ5H8A3 153 aa15.02■□□□□ -0
GABPB1-212ENST00000615671 TMEM256Q8N2U0 113 aa15.02■□□□□ -0
GABPB1-212ENST00000615671 SMPXQ9UHP9 88 aa15.02■□□□□ -0
GABPB1-212ENST00000615671 CACNA1GO43497 2377 aa15.02■□□□□ -0
GABPB1-212ENST00000615671 Q6ZQT7 251 aa15.02□□□□□ -0.01
GABPB1-212ENST00000615671 SBF1O95248 1867 aa15.02□□□□□ -0.01
GABPB1-212ENST00000615671 KIF26BQ2KJY2 2108 aa15.02□□□□□ -0.01
GABPB1-212ENST00000615671 TPSG1Q9NRR2 321 aa15.02□□□□□ -0.01
GABPB1-212ENST00000615671 DKK4Q9UBT3 224 aa15.02□□□□□ -0.01
GABPB1-212ENST00000615671 FANCMQ8IYD8 2048 aa15.01□□□□□ -0.01
GABPB1-212ENST00000615671 DEFB105AQ8NG35 78 aa15.01□□□□□ -0.01
GABPB1-212ENST00000615671 HIST1H2BLQ99880 126 aa15.01□□□□□ -0.01
GABPB1-212ENST00000615671 PRSS29PA6NIE9 313 aa15.01□□□□□ -0.01
GABPB1-212ENST00000615671 NDUFS5O43920 106 aa15.01□□□□□ -0.01
GABPB1-212ENST00000615671 FREM3P0C091 2139 aa15.01□□□□□ -0.01
GABPB1-212ENST00000615671 C8orf86Q6ZUL3 223 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 ALPK2Q86TB3 2170 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 DIAPH2-AS1Q14236 149 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 RBMY1FQ15415 496 aaKnown RBP15□□□□□ -0.01
GABPB1-212ENST00000615671 STPG4Q8N801 248 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 PI4KAP42356 2102 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 NDUFS7O75251 213 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 TMEM14EPQ6UXP3 125 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 MYO7BQ6PIF6 2116 aa15□□□□□ -0.01
GABPB1-212ENST00000615671 KLF5Q13887 457 aaPredicted RBP15□□□□□ -0.01
GABPB1-212ENST00000615671 GRNP28799 593 aaKnown RBP14.99□□□□□ -0.01
GABPB1-212ENST00000615671 UBE2BP63146 152 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 ZC2HC1BQ5TFG8 222 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 CYTL1Q9NRR1 136 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 LHFPL1Q86WI0 220 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 SIGMAR1Q99720 223 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 TICRRQ7Z2Z1 1910 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 NRGNQ92686 78 aa14.99□□□□□ -0.01
GABPB1-212ENST00000615671 Q6ZRM9 215 aa14.98□□□□□ -0.01
GABPB1-212ENST00000615671 RSPO3Q9BXY4 272 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-212ENST00000615671 NOP10Q9NPE3 64 aaKnown RBP14.98□□□□□ -0.01
GABPB1-212ENST00000615671 IGHV1OR15-1A0A075B7D0 117 aa14.98□□□□□ -0.01
GABPB1-212ENST00000615671 I3L3M4 83 aa14.98□□□□□ -0.01
GABPB1-212ENST00000615671 CHAC1Q9BUX1 264 aa14.98□□□□□ -0.01
GABPB1-212ENST00000615671 AMBPP02760 352 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 TMEM243Q9BU79 118 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 TCF15Q12870 199 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 C9JAW5 83 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 HEATR1Q9H583 2144 aaKnown RBP14.97□□□□□ -0.01
GABPB1-212ENST00000615671 IGHV4-4A0A075B6R2 117 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 TAL2Q16559 108 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 SCRT2Q9NQ03 307 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 POLEQ07864 2286 aa14.97□□□□□ -0.01
GABPB1-212ENST00000615671 IGHV4-59P01825 116 aa14.96□□□□□ -0.01
GABPB1-212ENST00000615671 AKAP6Q13023 2319 aa14.96□□□□□ -0.01
GABPB1-212ENST00000615671 CACNA1EQ15878 2313 aa14.96□□□□□ -0.01
GABPB1-212ENST00000615671 PRSS33Q8NF86 280 aa14.96□□□□□ -0.01
GABPB1-212ENST00000615671 ZDBF2Q9HCK1 2354 aa14.96□□□□□ -0.01
GABPB1-212ENST00000615671 DEFB112Q30KQ8 113 aa14.96□□□□□ -0.01
GABPB1-212ENST00000615671 MPZP25189 248 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 LYPD1Q8N2G4 141 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 LINC01549A6NIU2 74 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 SPINK8P0C7L1 97 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 HLA-DRB4P13762 266 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 Q6ZR03 302 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 HLA-DRB4X5D2U9 266 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 ZNF503-AS2A6NEH8 195 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 FGF16O43320 207 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 RPL18AQ02543 176 aaKnown RBP14.95□□□□□ -0.02
GABPB1-212ENST00000615671 APRG1Q8IVJ8 170 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 FAM186AA6NE01 2351 aa14.95□□□□□ -0.02
GABPB1-212ENST00000615671 TRAV12-1A0A0B4J245 112 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 PRSS57Q6UWY2 283 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 HAPLN4Q86UW8 402 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 HIST3H2BBQ8N257 126 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 DNAJC30Q96LL9 226 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 ESM1Q9NQ30 184 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 SYS1-DBNDD2H3BUS1 97 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 C3orf79P0CE67 100 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 PFN1P07737 140 aaKnown RBP14.94□□□□□ -0.02
GABPB1-212ENST00000615671 CDKN1BP46527 198 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 XCL1P47992 114 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 MED12Q93074 2177 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 GAGE2BQ13066 116 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 SPTA1P02549 2419 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 ZFAND6Q6FIF0 208 aa14.94□□□□□ -0.02
GABPB1-212ENST00000615671 LRRK1Q38SD2 2015 aa14.93□□□□□ -0.02
GABPB1-212ENST00000615671 KIR3DS1Q14943 382 aa14.93□□□□□ -0.02
GABPB1-212ENST00000615671 C17orf58Q2M2W7 97 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms