RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CT45A10P0DMU9 189 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 COX6B1P14854 86 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 HLA-DMBP28068 263 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 CRIP1P50238 77 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 DSCR9P59020 149 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 Q6ZWC4 215 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 SIGLECL1Q8N7X8 197 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 C18orf32Q8TCD1 76 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
NEK3-205ENST00000610828 CLPSL1A2RUU4 121 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 ZNF207O43670 478 aaKnown RBP10.53□□□□□ -0.72
NEK3-205ENST00000610828 RAB9AP51151 201 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 C16orf54Q6UWD8 224 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 ZNF843Q8N446 348 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 FBN2P35556 2912 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 IGHV3-49A0A0A0MS15 119 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 ZNF705FA8MVS1 300 aaPredicted RBP10.53□□□□□ -0.72
NEK3-205ENST00000610828 CRIP2P52943 208 aaPredicted RBP10.53□□□□□ -0.72
NEK3-205ENST00000610828 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 LRRK2Q5S007 2527 aa10.53□□□□□ -0.72
NEK3-205ENST00000610828 A0A1W2PS18 150 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 A6NDX4 124 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 A8MWP6 167 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 GPX1P07203 203 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 PMCHP20382 165 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 AMTP48728 403 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 METTL26Q96S19 204 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 NAGKQ9UJ70 344 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.735e-7■■■■□ 23.5
NEK3-205ENST00000610828 CENPEQ02224 2701 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 IGHG4P01861 327 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
NEK3-205ENST00000610828 IGF1P05019 195 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 SLC25A16P16260 332 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 Q8TAT8 98 aa10.52□□□□□ -0.73
NEK3-205ENST00000610828 ALKBH7Q9BT30 221 aaPredicted RBP10.52□□□□□ -0.73
NEK3-205ENST00000610828 PAX1P15863 534 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 BLCAPP62952 87 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 SRSF1Q07955 248 aaKnown RBP eCLIP10.51□□□□□ -0.73
NEK3-205ENST00000610828 VGLL1Q99990 258 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 ANKRD17O75179 2603 aaKnown RBP10.51□□□□□ -0.73
NEK3-205ENST00000610828 UBR5O95071 2799 aaPredicted RBP10.51□□□□□ -0.73
NEK3-205ENST00000610828 IGHG2P01859 326 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 LCN12Q6JVE5 192 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 PRR25Q96S07 402 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 TPPP3Q9BW30 176 aa10.51□□□□□ -0.73
NEK3-205ENST00000610828 A0A087X0K7 114 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 ZNF324O75467 553 aaPredicted RBP10.5□□□□□ -0.73
NEK3-205ENST00000610828 ZNF705DP0CH99 300 aaPredicted RBP10.5□□□□□ -0.73
NEK3-205ENST00000610828 ZNF705BP0CI00 300 aaPredicted RBP10.5□□□□□ -0.73
NEK3-205ENST00000610828 GATA3P23771 443 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
NEK3-205ENST00000610828 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 REC114Q7Z4M0 266 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 FAM19A2Q8N3H0 131 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 RNF182Q8N6D2 247 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 MAPK1IP1LQ8NDC0 245 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 POLQO75417 2590 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 M0QZK8 103 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 HAX1O00165 279 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 ARMS2P0C7Q2 107 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 ARL3P36405 182 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 FAM162BQ5T6X4 162 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 Q6ZS46 218 aa10.5□□□□□ -0.73
NEK3-205ENST00000610828 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 TMSB15BA0A087X1C1 80 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 SH2D1AO60880 128 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 NTF3P20783 257 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 PPIFP30405 207 aaKnown RBP10.49□□□□□ -0.73
NEK3-205ENST00000610828 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
NEK3-205ENST00000610828 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 LINC01356Q8N9X3 169 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 NRN1Q9NPD7 142 aa10.49□□□□□ -0.73
NEK3-205ENST00000610828 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
NEK3-205ENST00000610828 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 RNF114Q9Y508 228 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 USP9YO00507 2555 aaPredicted RBP10.48□□□□□ -0.73
NEK3-205ENST00000610828 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 PRAC2D3DTV9 90 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 KRTDAPP60985 99 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 RNASEKQ6P5S7 137 aaKnown RBP10.48□□□□□ -0.73
NEK3-205ENST00000610828 SLC50A1Q9BRV3 221 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 EPG5Q9HCE0 2579 aa10.48□□□□□ -0.73
NEK3-205ENST00000610828 HSBP1O75506 76 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 PF4V1P10720 104 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 KLK15Q9H2R5 256 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 TGFAP01135 160 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 ERCC8Q13216 396 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 RIGQ13278 110 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 Q6AWC8 147 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 NDFIP1Q9BT67 221 aa10.47□□□□□ -0.73
NEK3-205ENST00000610828 A0A096LNT2 108 aa10.46□□□□□ -0.73
NEK3-205ENST00000610828 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
NEK3-205ENST00000610828 ZNF80P51504 273 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms