RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 DSCAMO60469 2012 aa8.29□□□□□ -1.08
CTCFL-216ENST00000608263 TMEM8BA6NDV4 472 aa8.29□□□□□ -1.08
CTCFL-216ENST00000608263 M0R381 172 aa8.29□□□□□ -1.08
CTCFL-216ENST00000608263 CLEC19AQ6UXS0 136 aa8.29□□□□□ -1.08
CTCFL-216ENST00000608263 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
CTCFL-216ENST00000608263 FOXC2Q99958 501 aa8.29□□□□□ -1.08
CTCFL-216ENST00000608263 IGLV3-9A0A075B6K5 115 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 SMIM17P0DL12 118 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 LOXP28300 417 aaPredicted RBP8.28□□□□□ -1.08
CTCFL-216ENST00000608263 TRGV9Q99603 122 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 GUSBP1Q15486 140 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 ARPC1AQ92747 370 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 CTSZQ9UBR2 303 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 TNRC6AQ8NDV7 1962 aaKnown RBP8.28□□□□□ -1.08
CTCFL-216ENST00000608263 PLP1P60201 277 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 ZNF833PQ6ZTB9 187 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 ATP5L2Q7Z4Y8 100 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 Q86TA4 180 aa8.28□□□□□ -1.08
CTCFL-216ENST00000608263 PEF1Q9UBV8 284 aaKnown RBP8.28□□□□□ -1.08
CTCFL-216ENST00000608263 RIPPLY3P57055 190 aa8.27□□□□□ -1.08
CTCFL-216ENST00000608263 GLMPQ8WWB7 406 aa8.27□□□□□ -1.08
CTCFL-216ENST00000608263 FAM167A-AS1Q96KT0 104 aa8.27□□□□□ -1.08
CTCFL-216ENST00000608263 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.09
CTCFL-216ENST00000608263 IGHV1-24A0A0C4DH33 117 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 C22orf46C9J442 243 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 BUB1B-PAK6H3BSN5 160 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 ITGB1BP1O14713 200 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 TOMM40O96008 361 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 SRSF9Q13242 221 aaKnown RBP eCLIP8.27□□□□□ -1.09
CTCFL-216ENST00000608263 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 TMEM249Q2WGJ8 235 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 COX11Q9Y6N1 276 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 DSPP15924 2871 aaKnown RBP8.27□□□□□ -1.09
CTCFL-216ENST00000608263 LEPP41159 167 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 IL17RELQ6ZVW7 336 aa8.27□□□□□ -1.09
CTCFL-216ENST00000608263 ZNF418Q8TF45 676 aaPredicted RBP8.27□□□□□ -1.09
CTCFL-216ENST00000608263 MGAQ8IWI9 3026 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 FNDC10F2Z333 226 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 H3BUX3 64 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 LHBP01229 141 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 PF4P02776 101 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 GATA4P43694 442 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 EIF4EBP1Q13541 118 aaPredicted RBP8.26□□□□□ -1.09
CTCFL-216ENST00000608263 PRSS57Q6UWY2 283 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 TMEM75Q8N9X5 138 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 ST20Q9HBF5 79 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 SOX21Q9Y651 276 aaPredicted RBP8.26□□□□□ -1.09
CTCFL-216ENST00000608263 FABP2P12104 132 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 Q8N7P7 452 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 COL6A3P12111 3177 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 SCGB1C2P0DMR2 95 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 POU2AF1Q16633 256 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 CHCHD1Q96BP2 118 aaKnown RBP8.26□□□□□ -1.09
CTCFL-216ENST00000608263 TRAV30A0A087WSZ9 112 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 PSG9Q00887 426 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 Q5PR19 223 aa8.26□□□□□ -1.09
CTCFL-216ENST00000608263 NDUFA3O95167 84 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 TMEM155Q4W5P6 130 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 VMO1Q7Z5L0 202 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 Q8NA96 180 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 HIST1H4GQ99525 98 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 PRSS46E5RG02 174 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 ERCC8Q13216 396 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 RUSC1-AS1Q66K80 236 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 ATRQ13535 2644 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 LOC107984156A0A0G2JMH3 177 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 IGLC7A0M8Q6 106 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 SH2D1AO60880 128 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 HLA-DMBP28068 263 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 NDPQ00604 133 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 HIST2H2BCQ6DN03 193 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 LINC00322Q6ZN03 302 aaPredicted RBP8.25□□□□□ -1.09
CTCFL-216ENST00000608263 ARL17AQ8IVW1 177 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 Q96MF0 132 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 METTL26Q96S19 204 aa8.25□□□□□ -1.09
CTCFL-216ENST00000608263 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
CTCFL-216ENST00000608263 CCL25O15444 150 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 HBDP02042 147 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 RASL11AQ6T310 242 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 MEGF9Q9H1U4 602 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 SPCS1Q9Y6A9 102 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 DLX6P56179 175 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 FAM169BQ8N8A8 192 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 IGF2BP2-AS1Q96M15 143 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 B4DSR2 109 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 H7C2G1 150 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 SRD5A1P18405 259 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 RHOGP84095 191 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 HIST1H1AQ02539 215 aaPredicted RBP8.24□□□□□ -1.09
CTCFL-216ENST00000608263 ATP5G2Q06055 141 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 FAM74A4Q5TZK3 123 aa8.24□□□□□ -1.09
CTCFL-216ENST00000608263 MAST4O15021 2626 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms