RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
RNF40-212ENST00000602784 SPRY2O43597 315 aa10.16□□□□□ -0.78
RNF40-212ENST00000602784 CA1P00915 261 aaPredicted RBP10.16□□□□□ -0.78
RNF40-212ENST00000602784 TPT1P13693 172 aaKnown RBP10.16□□□□□ -0.78
RNF40-212ENST00000602784 UBE2L3P68036 154 aaKnown RBP10.16□□□□□ -0.78
RNF40-212ENST00000602784 ZFP69Q49AA0 526 aa10.16□□□□□ -0.78
RNF40-212ENST00000602784 BAP18Q8IXM2 172 aa10.16□□□□□ -0.78
RNF40-212ENST00000602784 STOML3Q8TAV4 291 aa10.16□□□□□ -0.78
RNF40-212ENST00000602784 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
RNF40-212ENST00000602784 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
RNF40-212ENST00000602784 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
RNF40-212ENST00000602784 C4BPBP20851 252 aa10.15□□□□□ -0.78
RNF40-212ENST00000602784 CNN1P51911 297 aaKnown RBP10.15□□□□□ -0.78
RNF40-212ENST00000602784 DEFB135Q30KP9 77 aa10.15□□□□□ -0.78
RNF40-212ENST00000602784 OR4B1Q8NGF8 309 aa10.15□□□□□ -0.78
RNF40-212ENST00000602784 SUN5Q8TC36 379 aa10.15□□□□□ -0.78
RNF40-212ENST00000602784 CTXND1A0A1B0GTU2 59 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 ZNF705FA8MVS1 300 aaPredicted RBP10.14□□□□□ -0.79
RNF40-212ENST00000602784 CXorf1O96002 111 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 ARL14EPLP0DKL9 152 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 AMTNQ6UX39 209 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 CSNK1G2-AS1Q8NCQ2 148 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 PHYHIPLQ96FC7 376 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 RETNQ9HD89 108 aa10.14□□□□□ -0.79
RNF40-212ENST00000602784 HMGB3O15347 200 aaKnown RBP10.13□□□□□ -0.79
RNF40-212ENST00000602784 EIF3GO75821 320 aaKnown RBP eCLIP10.13□□□□□ -0.79
RNF40-212ENST00000602784 IGKV3-20P01619 116 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 AMBPP02760 352 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 GCHFRP30047 84 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
RNF40-212ENST00000602784 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
RNF40-212ENST00000602784 ICAM4Q14773 271 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 ZNF726P1Q15940 193 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 EIF5AL1Q6IS14 154 aaKnown RBP10.13□□□□□ -0.79
RNF40-212ENST00000602784 DPPA3Q6W0C5 159 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 SLC51BQ86UW2 128 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 EXOC3-AS1Q8N2X6 119 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 C9orf62Q8N4C0 152 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 ARL6IP6Q8N6S5 226 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 TMEM167BQ9NRX6 74 aa10.13□□□□□ -0.79
RNF40-212ENST00000602784 PRAC2D3DTV9 90 aa10.12□□□□□ -0.79
RNF40-212ENST00000602784 M0R3E3 92 aa10.12□□□□□ -0.79
RNF40-212ENST00000602784 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
RNF40-212ENST00000602784 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
RNF40-212ENST00000602784 Q9H3A6 140 aa10.12□□□□□ -0.79
RNF40-212ENST00000602784 NPIPB6E9PJ23 425 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 CSN1S1P47710 185 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 FAM74A1Q5RGS3 127 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 SSX7Q7RTT5 188 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 RXFP4Q8TDU9 374 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 TMED6Q8WW62 240 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 LINC00477Q96M19 166 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 ODF3Q96PU9 254 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 SLC35B3Q9H1N7 401 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 OTORQ9NRC9 128 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
RNF40-212ENST00000602784 HUWE1Q7Z6Z7 4374 aaKnown RBP10.1□□□□□ -0.79
RNF40-212ENST00000602784 BOLA2-SMG1P6H3BVE0 249 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 RAB5CP51148 216 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 MBD3L1Q8WWY6 194 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 RARRES2Q99969 163 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 PPP1R14DQ9NXH3 145 aa10.1□□□□□ -0.79
RNF40-212ENST00000602784 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 MAP1LC3B2A6NCE7 125 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 PGPA6NDG6 321 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 ZNF705EA8MWA4 302 aaPredicted RBP10.09□□□□□ -0.79
RNF40-212ENST00000602784 SLC25A5P05141 298 aaKnown RBP10.09□□□□□ -0.79
RNF40-212ENST00000602784 TSPOP30536 169 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 FHITP49789 147 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
RNF40-212ENST00000602784 IGF2BP2-AS1Q96M15 143 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 WWC2-AS2Q96NR7 200 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 MAP1LC3BQ9GZQ8 125 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 EDA2RQ9HAV5 297 aa10.09□□□□□ -0.79
RNF40-212ENST00000602784 A0A1W2PRE2 83 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 CDKN1BP46527 198 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 FXYD7P58549 80 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 SPINK13Q1W4C9 94 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 CMTM2Q8TAZ6 248 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 FAM213BQ8TBF2 198 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 NEU1Q99519 415 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
RNF40-212ENST00000602784 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 SMIM9A6NGZ8 99 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 M0R2Z0 102 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 CRXO43186 299 aaPredicted RBP10.07□□□□□ -0.8
RNF40-212ENST00000602784 NMBP08949 121 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 PRB4P10163 310 aaPredicted RBP10.07□□□□□ -0.8
RNF40-212ENST00000602784 SFT2D1Q8WV19 159 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
RNF40-212ENST00000602784 GOLT1BQ9Y3E0 138 aa10.07□□□□□ -0.8
RNF40-212ENST00000602784 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
RNF40-212ENST00000602784 TRAV1-1A0A0B4J248 108 aa10.06□□□□□ -0.8
RNF40-212ENST00000602784 SERTM2A0A1B0GWG4 89 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms