RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SNRNP200O75643 2136 aaKnown RBP6.94□□□□□ -1.3
COMMD3-215ENST00000602574 FCER1GP30273 86 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 LOXL3P58215 753 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 HERVK_113P61574 105 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 RPL18AQ02543 176 aaKnown RBP6.94□□□□□ -1.3
COMMD3-215ENST00000602574 PMS2CLQ68D20 193 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 Q6ZPA2 131 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 FLVCR1-AS1Q8TAF5 88 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 GNG12Q9UBI6 72 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 Q9UFV3 132 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 TRAV26-2A0A0B4J265 109 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 CCL16O15467 120 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 ZNF883P0CG24 379 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 PRSS12P56730 875 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 RIGQ13278 110 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 IGFL2Q6UWQ7 119 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 WDR31Q8NA23 367 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 C10orf105Q8TEF2 133 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 LSM4Q9Y4Z0 139 aaKnown RBP6.94□□□□□ -1.3
COMMD3-215ENST00000602574 AGRNO00468 2067 aa6.94□□□□□ -1.3
COMMD3-215ENST00000602574 LRP4O75096 1905 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 SLC25A16P16260 332 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 HILS1P60008 231 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 LINC00482Q8N8I6 264 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 BORCS8Q96FH0 119 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 METTL26Q96S19 204 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 CYSTM1Q9H1C7 97 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 GOLGA4Q13439 2230 aaKnown RBP6.93□□□□□ -1.3
COMMD3-215ENST00000602574 TRBV6-6A0A0A6YYG2 114 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 LYZL6O75951 148 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 GP1BBP13224 206 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 LIFP15018 202 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 ERVK-16P61578 105 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 RTL8AQ9BWD3 113 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 TIMM8BQ9Y5J9 83 aaPredicted RBP6.93□□□□□ -1.3
COMMD3-215ENST00000602574 SHANK1Q9Y566 2161 aa6.93□□□□□ -1.3
COMMD3-215ENST00000602574 H0YGG7 62 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 SCRG1O75711 98 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 IGHG2P01859 326 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 PLNP26678 52 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 CDAP32320 146 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
COMMD3-215ENST00000602574 RPS21P63220 83 aaKnown RBP6.92□□□□□ -1.3
COMMD3-215ENST00000602574 SRSF9Q13242 221 aaKnown RBP eCLIP6.92□□□□□ -1.3
COMMD3-215ENST00000602574 MIC13Q5XKP0 118 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 CCL26Q9Y258 94 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 TANC2Q9HCD6 1990 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 STATHP02808 62 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 FAM104BQ5XKR9 115 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 ZNF497Q6ZNH5 498 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 FOXL2NBQ6ZUU3 175 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 MDP1Q86V88 176 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 DEC1Q9P2X7 70 aa6.92□□□□□ -1.3
COMMD3-215ENST00000602574 PRSS46E5RG02 174 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 PRR20EP86478 221 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 PRR20CP86479 221 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 PRR20DP86480 221 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 PRR20BP86481 221 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 PRR20AP86496 221 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 ZCCHC24Q8N2G6 241 aaKnown RBP6.91□□□□□ -1.3
COMMD3-215ENST00000602574 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 NABP2Q9BQ15 211 aa6.91□□□□□ -1.3
COMMD3-215ENST00000602574 Q8N8P6 123 aa6.9□□□□□ -1.3
COMMD3-215ENST00000602574 PLPPR2Q96GM1 343 aa6.9□□□□□ -1.3
COMMD3-215ENST00000602574 PGLYRP4Q96LB8 373 aa6.9□□□□□ -1.3
COMMD3-215ENST00000602574 OTORQ9NRC9 128 aa6.9□□□□□ -1.3
COMMD3-215ENST00000602574 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.3
COMMD3-215ENST00000602574 A0A0U1RQV1 116 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 A0A1B0GUT8 65 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 P01737 135 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 CD24P25063 80 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 RNF7Q9UBF6 113 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 PEMTQ9UBM1 199 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 CACNA1CQ13936 2221 aa6.9□□□□□ -1.31
COMMD3-215ENST00000602574 ARHGEF17Q96PE2 2063 aaPredicted RBP6.89□□□□□ -1.31
COMMD3-215ENST00000602574 RNF182Q8N6D2 247 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 WFDC11Q8NEX6 87 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 SSMEM1Q8WWF3 244 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 DYNLRB1Q9NP97 96 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 AMMECR1Q9Y4X0 333 aaPredicted RBP6.89□□□□□ -1.31
COMMD3-215ENST00000602574 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.89□□□□□ -1.31
COMMD3-215ENST00000602574 PRSS38A1L453 326 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 OVOL3O00110 214 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 ZNF137PP52743 207 aa6.89□□□□□ -1.31
COMMD3-215ENST00000602574 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 LILRA5A6NI73 299 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 KNCNA6PVL3 124 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 M0R135 149 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
COMMD3-215ENST00000602574 ERCC8Q13216 396 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
COMMD3-215ENST00000602574 ORMDL3Q8N138 153 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 IGKV1-6A0A0C4DH72 117 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 TRBV7-6A0A0J9YX20 115 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms