RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TFPI2P48307 235 aa13.97□□□□□ -0.17
SSBP4-212ENST00000601919 MDFIQ99750 246 aa13.97□□□□□ -0.17
SSBP4-212ENST00000601919 COL6A5A8TX70 2615 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 TRAV8-2A0A0B4J237 113 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 PEX7O00628 323 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 PSG3Q16557 428 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 GUCA2BQ16661 112 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 C11orf52Q96A22 123 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 ATG101Q9BSB4 218 aa13.96□□□□□ -0.17
SSBP4-212ENST00000601919 RNF182Q8N6D2 247 aa13.95□□□□□ -0.18
SSBP4-212ENST00000601919 ZNF738Q8NE65 137 aa13.95□□□□□ -0.18
SSBP4-212ENST00000601919 LINC00052Q96N35 136 aa13.95□□□□□ -0.18
SSBP4-212ENST00000601919 RPH3ALQ9UNE2 315 aa13.95□□□□□ -0.18
SSBP4-212ENST00000601919 SCO2A0A1W2PP80 73 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 C9JQL5 133 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 M0R3E3 92 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 TCRAP04437 139 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 S100A9P06702 114 aaKnown RBP13.94□□□□□ -0.18
SSBP4-212ENST00000601919 AKR1C3P42330 323 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 CNN1P51911 297 aaKnown RBP13.94□□□□□ -0.18
SSBP4-212ENST00000601919 CEBPGP53567 150 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 CMC4P56277 68 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-212ENST00000601919 SOHLH1Q5JUK2 328 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 IGFL4Q6B9Z1 124 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 CYB561D1Q8N8Q1 229 aa13.94□□□□□ -0.18
SSBP4-212ENST00000601919 STAB1Q9NY15 2570 aa13.93□□□□□ -0.18
SSBP4-212ENST00000601919 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
SSBP4-212ENST00000601919 FBLL1A6NHQ2 334 aaKnown RBP13.93□□□□□ -0.18
SSBP4-212ENST00000601919 DIRC3C9JPN6 131 aa13.93□□□□□ -0.18
SSBP4-212ENST00000601919 SFTA3P0C7M3 94 aa13.93□□□□□ -0.18
SSBP4-212ENST00000601919 GNG5P63218 68 aa13.93□□□□□ -0.18
SSBP4-212ENST00000601919 PRR31Q5SQ13 230 aa13.93□□□□□ -0.18
SSBP4-212ENST00000601919 ZNF688P0C7X2 276 aa13.92□□□□□ -0.18
SSBP4-212ENST00000601919 HLA-DMBP28068 263 aa13.92□□□□□ -0.18
SSBP4-212ENST00000601919 FAM74A3Q4VXF1 159 aa13.92□□□□□ -0.18
SSBP4-212ENST00000601919 RBAKDNA6NC62 111 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 IZUMO1RA6ND01 250 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 UBE2G1P62253 170 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 PSMG4Q5JS54 123 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 GOLT1AQ6ZVE7 132 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 C2CD4CQ8TF44 421 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 FMC1Q96HJ9 113 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 C20orf173Q96LM9 149 aa13.91□□□□□ -0.18
SSBP4-212ENST00000601919 ZNF256Q9Y2P7 627 aaPredicted RBP13.91□□□□□ -0.18
SSBP4-212ENST00000601919 ZNF705FA8MVS1 300 aaPredicted RBP13.9□□□□□ -0.18
SSBP4-212ENST00000601919 F8W036 122 aa13.9□□□□□ -0.18
SSBP4-212ENST00000601919 TAS2R60P59551 318 aa13.9□□□□□ -0.18
SSBP4-212ENST00000601919 KRTAP21-3Q3LHN1 58 aa13.9□□□□□ -0.18
SSBP4-212ENST00000601919 TMEM75Q8N9X5 138 aa13.9□□□□□ -0.18
SSBP4-212ENST00000601919 OR10J6PQ8NGY7 276 aa13.9□□□□□ -0.18
SSBP4-212ENST00000601919 PARLQ9H300 379 aa13.9□□□□□ -0.18
SSBP4-212ENST00000601919 ZNF727A8MUV8 499 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 WIPF1O43516 503 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 IGLL1P15814 213 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 RPL35P42766 123 aaKnown RBP13.89□□□□□ -0.19
SSBP4-212ENST00000601919 TMEM183BQ1AE95 376 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 ZNF674Q2M3X9 581 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 EBLN2Q6P2I7 272 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 FAM24BQ8N5W8 94 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 SPATA3Q8NHX4 192 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 SMIM7Q9BQ49 75 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 KLF12Q9Y4X4 402 aa13.89□□□□□ -0.19
SSBP4-212ENST00000601919 FAM110AQ9BQ89 295 aa13.88□□□□□ -0.19
SSBP4-212ENST00000601919 ZMAT5Q9UDW3 170 aaKnown RBP13.88□□□□□ -0.19
SSBP4-212ENST00000601919 IGKV2-40A0A087WW87 121 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-212ENST00000601919 TRBV6-1A0A0K0K1D8 114 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 IGKV2D-40P01614 121 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-212ENST00000601919 GNG4P50150 75 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 DEFB131AP59861 70 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 BEAN1Q3B7T3 259 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 TMEM78Q5T7P6 136 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 FOXI2Q6ZQN5 318 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 OR8A1Q8NGG7 326 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 NIPSNAP3BQ9BS92 247 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 DERL1Q9BUN8 251 aa13.87□□□□□ -0.19
SSBP4-212ENST00000601919 OR11H12B2RN74 326 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 C9JCJ5 164 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 DUSP14O95147 198 aaKnown RBP13.86□□□□□ -0.19
SSBP4-212ENST00000601919 FLI1Q01543 452 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-212ENST00000601919 C9orf47Q6ZRZ4 202 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 LINC00477Q96M19 166 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 LINC00479Q96M42 142 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 MAP6D1Q9H9H5 199 aa13.86□□□□□ -0.19
SSBP4-212ENST00000601919 TRAV34A0A0B4J273 112 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 HIST1H1AQ02539 215 aaPredicted RBP13.85□□□□□ -0.19
SSBP4-212ENST00000601919 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 NDFIP1Q9BT67 221 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 NAT8Q9UHE5 227 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 PSG8Q9UQ74 426 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 ZFP30Q9Y2G7 519 aa13.85□□□□□ -0.19
SSBP4-212ENST00000601919 TRAV8-1A0A0A6YYK1 113 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 NPIPB6E9PJ23 425 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 CENPWQ5EE01 88 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 C10orf91Q5T1B1 145 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms