RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TRAV8-2A0A0B4J237 113 aa17.02■□□□□ 0.32
IRF3-228ENST00000601291 M0R3E3 92 aa17.02■□□□□ 0.32
IRF3-228ENST00000601291 APOC3P02656 99 aa17.02■□□□□ 0.32
IRF3-228ENST00000601291 ID1P41134 155 aa17.02■□□□□ 0.32
IRF3-228ENST00000601291 GBGT1Q8N5D6 347 aa17.02■□□□□ 0.32
IRF3-228ENST00000601291 SERTM2A0A1B0GWG4 89 aa17.02■□□□□ 0.31
IRF3-228ENST00000601291 SAP30O75446 220 aa17.02■□□□□ 0.31
IRF3-228ENST00000601291 HLA-DMBP28068 263 aa17.02■□□□□ 0.31
IRF3-228ENST00000601291 RPL35P42766 123 aaKnown RBP17.02■□□□□ 0.31
IRF3-228ENST00000601291 DEFB114Q30KQ6 69 aa17.02■□□□□ 0.31
IRF3-228ENST00000601291 RNF182Q8N6D2 247 aa17.02■□□□□ 0.31
IRF3-228ENST00000601291 DCANP1Q8TF63 244 aa17.02■□□□□ 0.31
IRF3-228ENST00000601291 DIRC3C9JPN6 131 aa17.01■□□□□ 0.31
IRF3-228ENST00000601291 UBE2G1P62253 170 aa17.01■□□□□ 0.31
IRF3-228ENST00000601291 GOLT1AQ6ZVE7 132 aa17.01■□□□□ 0.31
IRF3-228ENST00000601291 WFDC3Q8IUB2 231 aa17.01■□□□□ 0.31
IRF3-228ENST00000601291 S100A9P06702 114 aaKnown RBP17■□□□□ 0.31
IRF3-228ENST00000601291 TFPI2P48307 235 aa17■□□□□ 0.31
IRF3-228ENST00000601291 PSG3Q16557 428 aa17■□□□□ 0.31
IRF3-228ENST00000601291 LCN12Q6JVE5 192 aa17■□□□□ 0.31
IRF3-228ENST00000601291 SHISA2Q6UWI4 295 aa17■□□□□ 0.31
IRF3-228ENST00000601291 NAT8Q9UHE5 227 aa17■□□□□ 0.31
IRF3-228ENST00000601291 TRAV25A0A0B4J276 109 aa16.99■□□□□ 0.31
IRF3-228ENST00000601291 TSPAN4O14817 238 aa16.99■□□□□ 0.31
IRF3-228ENST00000601291 TAS2R60P59551 318 aa16.99■□□□□ 0.31
IRF3-228ENST00000601291 TMEM61Q8N0U2 210 aa16.99■□□□□ 0.31
IRF3-228ENST00000601291 SVBPQ8N300 66 aa16.99■□□□□ 0.31
IRF3-228ENST00000601291 FMC1Q96HJ9 113 aa16.99■□□□□ 0.31
IRF3-228ENST00000601291 TRAV2A0A0B4J234 112 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 SNRPD3P62318 126 aaKnown RBP16.98■□□□□ 0.31
IRF3-228ENST00000601291 TMEM183BQ1AE95 376 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 TMEM241Q24JQ0 296 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 CD300EQ496F6 205 aaPredicted RBP16.98■□□□□ 0.31
IRF3-228ENST00000601291 C9JCJ5 164 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 K7EQG2 157 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 GNG4P50150 75 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 TMEM75Q8N9X5 138 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 ZNF738Q8NE65 137 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 LINC00479Q96M42 142 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 KLF12Q9Y4X4 402 aa16.98■□□□□ 0.31
IRF3-228ENST00000601291 TRAV34A0A0B4J273 112 aa16.97■□□□□ 0.31
IRF3-228ENST00000601291 ZNF705FA8MVS1 300 aaPredicted RBP16.97■□□□□ 0.31
IRF3-228ENST00000601291 GUCA2BQ16661 112 aa16.97■□□□□ 0.31
IRF3-228ENST00000601291 TVP23CQ96ET8 276 aa16.97■□□□□ 0.31
IRF3-228ENST00000601291 SPAG8Q99932 426 aaPredicted RBP16.97■□□□□ 0.31
IRF3-228ENST00000601291 PNRC1Q12796 327 aaPredicted RBP16.96■□□□□ 0.31
IRF3-228ENST00000601291 CENPWQ5EE01 88 aa16.96■□□□□ 0.31
IRF3-228ENST00000601291 C20orf173Q96LM9 149 aa16.96■□□□□ 0.31
IRF3-228ENST00000601291 FBLL1A6NHQ2 334 aaKnown RBP16.95■□□□□ 0.3
IRF3-228ENST00000601291 SNAPINO95295 136 aa16.95■□□□□ 0.3
IRF3-228ENST00000601291 OR2K2Q8NGT1 345 aa16.95■□□□□ 0.3
IRF3-228ENST00000601291 SDF2L1Q9HCN8 221 aa16.95■□□□□ 0.3
IRF3-228ENST00000601291 TRBV20OR9-2A0A075B6H5 130 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 IGKV2-40A0A087WW87 121 aaPredicted RBP16.94■□□□□ 0.3
IRF3-228ENST00000601291 RBAKDNA6NC62 111 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 OR4C46A6NHA9 309 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 IGKV2D-40P01614 121 aaPredicted RBP16.94■□□□□ 0.3
IRF3-228ENST00000601291 IGF2BP2-AS1Q96M15 143 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 TRAV8-1A0A0A6YYK1 113 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 M0R036 132 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 IGLV1-51P01701 117 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 FLI1Q01543 452 aaPredicted RBP16.94■□□□□ 0.3
IRF3-228ENST00000601291 SGK494Q96LW2 274 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 LY96Q9Y6Y9 160 aa16.94■□□□□ 0.3
IRF3-228ENST00000601291 TRBV6-1A0A0K0K1D8 114 aa16.93■□□□□ 0.3
IRF3-228ENST00000601291 PRAC2D3DTV9 90 aa16.93■□□□□ 0.3
IRF3-228ENST00000601291 ZNF688P0C7X2 276 aa16.93■□□□□ 0.3
IRF3-228ENST00000601291 PRB4P10163 310 aaPredicted RBP16.93■□□□□ 0.3
IRF3-228ENST00000601291 ADIRFQ15847 76 aa16.93■□□□□ 0.3
IRF3-228ENST00000601291 Q86TA4 180 aa16.93■□□□□ 0.3
IRF3-228ENST00000601291 BAGE2Q86Y30 109 aa16.93■□□□□ 0.3
IRF3-228ENST00000601291 IGLV2-11P01706 119 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 CD33P20138 364 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 INSL3P51460 131 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 PSMG4Q5JS54 123 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 PRNTQ86SH4 94 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 FAM24BQ8N5W8 94 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 PSG8Q9UQ74 426 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 ATRQ13535 2644 aa16.92■□□□□ 0.3
IRF3-228ENST00000601291 LTAP01374 205 aa16.91■□□□□ 0.3
IRF3-228ENST00000601291 RPL23P62829 140 aaKnown RBP16.91■□□□□ 0.3
IRF3-228ENST00000601291 LINC01551Q86U37 167 aa16.91■□□□□ 0.3
IRF3-228ENST00000601291 CLRN3Q8NCR9 226 aa16.91■□□□□ 0.3
IRF3-228ENST00000601291 OR10J6PQ8NGY7 276 aa16.91■□□□□ 0.3
IRF3-228ENST00000601291 SMIM12Q96EX1 92 aa16.91■□□□□ 0.3
IRF3-228ENST00000601291 MCRIP2Q9BUT9 160 aaKnown RBP16.91■□□□□ 0.3
IRF3-228ENST00000601291 PGPEP1LA6NFU8 196 aa16.9■□□□□ 0.3
IRF3-228ENST00000601291 C9orf66Q5T8R8 295 aa16.9■□□□□ 0.3
IRF3-228ENST00000601291 IZUMO1RA6ND01 250 aa16.89■□□□□ 0.3
IRF3-228ENST00000601291 TMEM78Q5T7P6 136 aa16.89■□□□□ 0.3
IRF3-228ENST00000601291 OCC1Q8TAD7 63 aa16.89■□□□□ 0.3
IRF3-228ENST00000601291 VGLL1Q99990 258 aa16.89■□□□□ 0.3
IRF3-228ENST00000601291 ZFP30Q9Y2G7 519 aa16.89■□□□□ 0.3
IRF3-228ENST00000601291 NDFIP1Q9BT67 221 aa16.89■□□□□ 0.29
IRF3-228ENST00000601291 B4DEV8 164 aa16.88■□□□□ 0.29
IRF3-228ENST00000601291 RHEBQ15382 184 aa16.88■□□□□ 0.29
IRF3-228ENST00000601291 C9orf47Q6ZRZ4 202 aa16.88■□□□□ 0.29
IRF3-228ENST00000601291 NHLRC2Q8NBF2 726 aa16.88■□□□□ 0.29
IRF3-228ENST00000601291 OR8A1Q8NGG7 326 aa16.88■□□□□ 0.29
IRF3-228ENST00000601291 AURKAIP1Q9NWT8 199 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms