RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 EXOC3-AS1Q8N2X6 119 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 GRAMD2BQ96HH9 432 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 DAZ1Q9NQZ3 744 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 UFC1Q9Y3C8 167 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 IGHV3-49A0A0A0MS15 119 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 CNN1P51911 297 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 RAB4BP61018 213 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 ADIRFQ15847 76 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 CMTM2Q8TAZ6 248 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 ATG101Q9BSB4 218 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 LY96Q9Y6Y9 160 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 HIVEP2P31629 2446 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 SLC17A3O00476 420 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 C4orf3Q8WVX3 66 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 GLMPQ8WWB7 406 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
SHKBP1-224ENST00000600718 ANK3Q12955 4377 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 TRBV20OR9-2A0A075B6H5 130 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 IGHV4OR15-8A0A075B7B6 117 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 A0A087WW49 117 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 IGHV7-4-1A0A0J9YVY3 117 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 GNG5P63218 68 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 TM4SF20Q53R12 229 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 LINC01551Q86U37 167 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 PRO1933Q9H354 126 aa13.48□□□□□ -0.25
SHKBP1-224ENST00000600718 LGALS9O00182 355 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 TCRAP04437 139 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 SMPXQ9UHP9 88 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 KLF12Q9Y4X4 402 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 GNG4P50150 75 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 TMEM183BQ1AE95 376 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 ARL6IP6Q8N6S5 226 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
SHKBP1-224ENST00000600718 HOXD3P31249 432 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 CENPWQ5EE01 88 aa13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 KHDC1LQ5JSQ8 128 aa13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 RHPN1-AS1Q9BWJ2 59 aa13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 ZNF331Q9NQX6 463 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 RPH3ALQ9UNE2 315 aa13.46□□□□□ -0.25
SHKBP1-224ENST00000600718 A8MWP6 167 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 BMI1P35226 326 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 C18orf65Q6ZTR6 163 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 PYGO2Q9BRQ0 406 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 SLC50A1Q9BRV3 221 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 LINC01619G3V211 115 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 CHEK1O14757 476 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 GZMBP10144 247 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 CSN1S1P47710 185 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 DPF1Q92782 380 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 FMC1Q96HJ9 113 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 IGF2BP2-AS1Q96M15 143 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 NDUFAF3Q9BU61 184 aa13.45□□□□□ -0.26
SHKBP1-224ENST00000600718 TRAV34A0A0B4J273 112 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 PGPEP1LA6NFU8 196 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 ISLRO14498 428 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 GCGP01275 180 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 SYNJ2BPP57105 145 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 UBE2G1P62253 170 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 KLF5Q13887 457 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 KLHL30-AS1Q8NEE0 82 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 RNF114Q9Y508 228 aa13.44□□□□□ -0.26
SHKBP1-224ENST00000600718 K7EQM0 130 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 AMBPP02760 352 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 CD28P10747 220 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 AURKAIP1Q9NWT8 199 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 DIRC3C9JPN6 131 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 GOLT1AQ6ZVE7 132 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 BAGE2Q86Y30 109 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 OR11H1Q8NG94 326 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 CLEC5AQ9NY25 188 aa13.43□□□□□ -0.26
SHKBP1-224ENST00000600718 TMEM213A2RRL7 107 aa13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 M0R3E3 92 aa13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 HAX1O00165 279 aa13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 NEU1Q99519 415 aa13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 TSSC4Q9Y5U2 329 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-224ENST00000600718 TRBV6-1A0A0K0K1D8 114 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 PROK1P58294 105 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 DEFB136Q30KP8 78 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 C8orf86Q6ZUL3 223 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 SMIM12Q96EX1 92 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 K7EN84 100 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 IGLV2-8P01709 118 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 TMEM75Q8N9X5 138 aa13.41□□□□□ -0.26
SHKBP1-224ENST00000600718 SLURP1P55000 103 aa13.4□□□□□ -0.26
SHKBP1-224ENST00000600718 SFRP2Q96HF1 295 aa13.4□□□□□ -0.26
SHKBP1-224ENST00000600718 CITED2Q99967 270 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-224ENST00000600718 LTAP01374 205 aa13.4□□□□□ -0.27
SHKBP1-224ENST00000600718 NUTF2P61970 127 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms