RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ZNF266Q14584 549 aa20.32■□□□□ 0.84
SSBP4-206ENST00000599699 BAP18Q8IXM2 172 aa20.32■□□□□ 0.84
SSBP4-206ENST00000599699 TRAV12-2A0A075B6T6 113 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 LCE6AA0A183 80 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 JTBO76095 146 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 NDUFB4O95168 129 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 HBE1P02100 147 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 OR10J4P0C629 311 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 EMP1P54849 157 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 AAMDCQ9H7C9 122 aa20.31■□□□□ 0.84
SSBP4-206ENST00000599699 NBEAP1P0C6P0 100 aa20.3■□□□□ 0.84
SSBP4-206ENST00000599699 ACOT6Q3I5F7 207 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-206ENST00000599699 RNF141Q8WVD5 230 aa20.3■□□□□ 0.84
SSBP4-206ENST00000599699 TMEM189A5PLL7 270 aa20.29■□□□□ 0.84
SSBP4-206ENST00000599699 CRXO43186 299 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-206ENST00000599699 TAS2R45P59539 299 aa20.29■□□□□ 0.84
SSBP4-206ENST00000599699 EXOC3-AS1Q8N2X6 119 aa20.29■□□□□ 0.84
SSBP4-206ENST00000599699 HSD17B11Q8NBQ5 300 aa20.29■□□□□ 0.84
SSBP4-206ENST00000599699 PRELID1Q9Y255 219 aa20.29■□□□□ 0.84
SSBP4-206ENST00000599699 DYNC2H1Q8NCM8 4307 aaKnown RBP20.29■□□□□ 0.84
SSBP4-206ENST00000599699 M0R3E3 92 aa20.28■□□□□ 0.84
SSBP4-206ENST00000599699 RRN3P1Q2M238 152 aa20.28■□□□□ 0.84
SSBP4-206ENST00000599699 KHDC3LQ587J8 217 aa20.28■□□□□ 0.84
SSBP4-206ENST00000599699 FXYD5Q96DB9 178 aa20.28■□□□□ 0.84
SSBP4-206ENST00000599699 MRPL53Q96EL3 112 aaKnown RBP20.28■□□□□ 0.84
SSBP4-206ENST00000599699 CELA1Q9UNI1 258 aa20.28■□□□□ 0.84
SSBP4-206ENST00000599699 M6PRP20645 277 aa20.27■□□□□ 0.84
SSBP4-206ENST00000599699 CDKN1BP46527 198 aa20.27■□□□□ 0.84
SSBP4-206ENST00000599699 ICAM4Q14773 271 aa20.27■□□□□ 0.84
SSBP4-206ENST00000599699 TNFSF18Q9UNG2 199 aa20.27■□□□□ 0.84
SSBP4-206ENST00000599699 LOC102723971A0A1B0GUV8 181 aa20.26■□□□□ 0.83
SSBP4-206ENST00000599699 A0A1W2PPV4 95 aa20.26■□□□□ 0.83
SSBP4-206ENST00000599699 TSPOP30536 169 aa20.26■□□□□ 0.83
SSBP4-206ENST00000599699 UBE2L3P68036 154 aaKnown RBP20.26■□□□□ 0.83
SSBP4-206ENST00000599699 RPP25LQ8N5L8 163 aaKnown RBP20.26■□□□□ 0.83
SSBP4-206ENST00000599699 RAB2AP61019 212 aa20.25■□□□□ 0.83
SSBP4-206ENST00000599699 FAM122CQ6P4D5 195 aa20.25■□□□□ 0.83
SSBP4-206ENST00000599699 RNF222A6NCQ9 220 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 NPIPB6E9PJ23 425 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 EIF3GO75821 320 aaKnown RBP eCLIP20.24■□□□□ 0.83
SSBP4-206ENST00000599699 SPART-AS1P0CW21 52 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 Q6ZTC4 211 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 ZNF767PQ75MW2 155 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 OR10G4Q8NGN3 311 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 OR10G9Q8NGN4 311 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 OR10G7Q8NGN6 311 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 PHYHIPLQ96FC7 376 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 LINC01587Q99440 93 aa20.24■□□□□ 0.83
SSBP4-206ENST00000599699 ZNF705GA8MUZ8 300 aaPredicted RBP20.23■□□□□ 0.83
SSBP4-206ENST00000599699 C11orf94C9JXX5 98 aa20.23■□□□□ 0.83
SSBP4-206ENST00000599699 ZNF503Q96F45 646 aa20.23■□□□□ 0.83
SSBP4-206ENST00000599699 BORCS7-ASMTA0A0B4J1R7 106 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 CT45A10P0DMU9 189 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 ATP6V0CP27449 155 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 RANP62826 216 aaKnown RBP20.22■□□□□ 0.83
SSBP4-206ENST00000599699 ERCC8Q13216 396 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 TMEM256Q8N2U0 113 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 C2CD4CQ8TF44 421 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 PSMG3Q9BT73 122 aaPredicted RBP20.22■□□□□ 0.83
SSBP4-206ENST00000599699 RYR3Q15413 4870 aa20.22■□□□□ 0.83
SSBP4-206ENST00000599699 J3KRW8 73 aa20.21■□□□□ 0.83
SSBP4-206ENST00000599699 PRM2P04554 102 aa20.21■□□□□ 0.83
SSBP4-206ENST00000599699 HTN1P15515 57 aa20.21■□□□□ 0.83
SSBP4-206ENST00000599699 LEPP41159 167 aa20.21■□□□□ 0.83
SSBP4-206ENST00000599699 C12orf74Q32Q52 190 aa20.21■□□□□ 0.83
SSBP4-206ENST00000599699 OR2G3Q8NGZ4 309 aa20.21■□□□□ 0.83
SSBP4-206ENST00000599699 TRAV10A0A0B4J240 114 aa20.2■□□□□ 0.82
SSBP4-206ENST00000599699 G3V3Q6 166 aa20.2■□□□□ 0.82
SSBP4-206ENST00000599699 SMLR1H3BR10 107 aa20.2■□□□□ 0.82
SSBP4-206ENST00000599699 ARPC5O15511 151 aa20.2■□□□□ 0.82
SSBP4-206ENST00000599699 KIR3DS1Q14943 382 aa20.2■□□□□ 0.82
SSBP4-206ENST00000599699 RPL7L1Q6DKI1 246 aaKnown RBP20.2■□□□□ 0.82
SSBP4-206ENST00000599699 YTHDF2Q9Y5A9 579 aaKnown RBP20.2■□□□□ 0.82
SSBP4-206ENST00000599699 HMGB3O15347 200 aaKnown RBP20.19■□□□□ 0.82
SSBP4-206ENST00000599699 FAM222AQ5U5X8 452 aa20.19■□□□□ 0.82
SSBP4-206ENST00000599699 ODF3Q96PU9 254 aa20.19■□□□□ 0.82
SSBP4-206ENST00000599699 SH3BGRL3Q9H299 93 aa20.19■□□□□ 0.82
SSBP4-206ENST00000599699 IGKV2-40A0A087WW87 121 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-206ENST00000599699 TEX48A0A1B0GUV7 120 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 IGKV2D-40P01614 121 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-206ENST00000599699 MBP02144 154 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 CSN1S1P47710 185 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 CDC34P49427 236 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-206ENST00000599699 GFI1BQ5VTD9 330 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 PQLC2Q6ZP29 291 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 LYPD1Q8N2G4 141 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 GNPNAT1Q96EK6 184 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-206ENST00000599699 LINC00477Q96M19 166 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 LYSTQ99698 3801 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 Q9H3A6 140 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 DKK2Q9UBU2 259 aa20.18■□□□□ 0.82
SSBP4-206ENST00000599699 IGLL5B9A064 214 aa20.17■□□□□ 0.82
SSBP4-206ENST00000599699 TAS2R60P59551 318 aa20.17■□□□□ 0.82
SSBP4-206ENST00000599699 SERF2P84101 59 aa20.17■□□□□ 0.82
SSBP4-206ENST00000599699 AGPAT4-IT1Q9H0P7 198 aa20.17■□□□□ 0.82
SSBP4-206ENST00000599699 H7BYZ3 331 aa20.16■□□□□ 0.82
SSBP4-206ENST00000599699 PLECQ15149 4684 aaKnown RBP20.16■□□□□ 0.82
SSBP4-206ENST00000599699 TMEM78Q5T7P6 136 aa20.16■□□□□ 0.82
SSBP4-206ENST00000599699 C20orf144Q9BQM9 153 aa20.16■□□□□ 0.82
SSBP4-206ENST00000599699 SACSQ9NZJ4 4579 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms