RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SOHLH1Q5JUK2 328 aa11.64□□□□□ -0.55
UPF1-206ENST00000598471 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
UPF1-206ENST00000598471 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
UPF1-206ENST00000598471 CYB561D1Q8N8Q1 229 aa11.64□□□□□ -0.55
UPF1-206ENST00000598471 SPAG8Q99932 426 aaPredicted RBP11.64□□□□□ -0.55
UPF1-206ENST00000598471 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
UPF1-206ENST00000598471 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 K7EQG2 157 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 SOCS3O14543 225 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 TFPI2P48307 235 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
UPF1-206ENST00000598471 PSG3Q16557 428 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 C9orf66Q5T8R8 295 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 DCANP1Q8TF63 244 aa11.63□□□□□ -0.55
UPF1-206ENST00000598471 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 F8W036 122 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 M0R3E3 92 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 IGLV1-51P01701 117 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 TCRAP04437 139 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
UPF1-206ENST00000598471 GNG5P63218 68 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 FAM74A3Q4VXF1 159 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 ZNF738Q8NE65 137 aa11.62□□□□□ -0.55
UPF1-206ENST00000598471 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 HLA-DMBP28068 263 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 UBE2G1P62253 170 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 GUCA2BQ16661 112 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 ZNF674Q2M3X9 581 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 IGFL4Q6B9Z1 124 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 LINC00052Q96N35 136 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 SMIM7Q9BQ49 75 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 SEC11CQ9BY50 192 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 GPR61Q9BZJ8 451 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 PARLQ9H300 379 aa11.61□□□□□ -0.55
UPF1-206ENST00000598471 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
UPF1-206ENST00000598471 ZNF727A8MUV8 499 aa11.6□□□□□ -0.55
UPF1-206ENST00000598471 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
UPF1-206ENST00000598471 WFDC9Q8NEX5 89 aa11.6□□□□□ -0.55
UPF1-206ENST00000598471 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
UPF1-206ENST00000598471 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
UPF1-206ENST00000598471 WNK1Q9H4A3 2382 aa11.59□□□□□ -0.55
UPF1-206ENST00000598471 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
UPF1-206ENST00000598471 S100A1P23297 94 aa11.59□□□□□ -0.55
UPF1-206ENST00000598471 RPL35P42766 123 aaKnown RBP11.59□□□□□ -0.55
UPF1-206ENST00000598471 TAS2R60P59551 318 aa11.59□□□□□ -0.55
UPF1-206ENST00000598471 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
UPF1-206ENST00000598471 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
UPF1-206ENST00000598471 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
UPF1-206ENST00000598471 CMC4P56277 68 aaPredicted RBP11.58□□□□□ -0.56
UPF1-206ENST00000598471 PSMG4Q5JS54 123 aa11.58□□□□□ -0.56
UPF1-206ENST00000598471 TMEM75Q8N9X5 138 aa11.58□□□□□ -0.56
UPF1-206ENST00000598471 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
UPF1-206ENST00000598471 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
UPF1-206ENST00000598471 IZUMO1RA6ND01 250 aa11.57□□□□□ -0.56
UPF1-206ENST00000598471 C9JCJ5 164 aa11.57□□□□□ -0.56
UPF1-206ENST00000598471 TMEM183BQ1AE95 376 aa11.57□□□□□ -0.56
UPF1-206ENST00000598471 DERL1Q9BUN8 251 aa11.57□□□□□ -0.56
UPF1-206ENST00000598471 NAT8Q9UHE5 227 aa11.57□□□□□ -0.56
UPF1-206ENST00000598471 KLF12Q9Y4X4 402 aa11.57□□□□□ -0.56
UPF1-206ENST00000598471 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
UPF1-206ENST00000598471 TRBV6-1A0A0K0K1D8 114 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
UPF1-206ENST00000598471 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 GNG4P50150 75 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 FLI1Q01543 452 aaPredicted RBP11.56□□□□□ -0.56
UPF1-206ENST00000598471 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 C10orf91Q5T1B1 145 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 TMEM78Q5T7P6 136 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
UPF1-206ENST00000598471 CARHSP1Q9Y2V2 147 aaKnown RBP11.56□□□□□ -0.56
UPF1-206ENST00000598471 STAB1Q9NY15 2570 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 TRAV34A0A0B4J273 112 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 PRR31Q5SQ13 230 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 Q86TA4 180 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 NDFIP1Q9BT67 221 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
UPF1-206ENST00000598471 ZNF256Q9Y2P7 627 aaPredicted RBP11.55□□□□□ -0.56
UPF1-206ENST00000598471 APOC3P02656 99 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 IGLL1P15814 213 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 DEFB131AP59861 70 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 HIST1H1AQ02539 215 aaPredicted RBP11.54□□□□□ -0.56
UPF1-206ENST00000598471 PNRC1Q12796 327 aaPredicted RBP11.54□□□□□ -0.56
UPF1-206ENST00000598471 FOXI2Q6ZQN5 318 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 PRNTQ86SH4 94 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 BAGE2Q86Y30 109 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 OR8A1Q8NGG7 326 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 TVP23CQ96ET8 276 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 SMIM12Q96EX1 92 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
UPF1-206ENST00000598471 LY96Q9Y6Y9 160 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms