RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ADIRFQ15847 76 aa15.74■□□□□ 0.11
PNKP-203ENST00000593946 ADAMTSL5Q6ZMM2 481 aa15.74■□□□□ 0.11
PNKP-203ENST00000593946 TCF24Q7RTU0 167 aa15.74■□□□□ 0.11
PNKP-203ENST00000593946 PEMTQ9UBM1 199 aa15.74■□□□□ 0.11
PNKP-203ENST00000593946 LY96Q9Y6Y9 160 aa15.74■□□□□ 0.11
PNKP-203ENST00000593946 B4DEV8 164 aa15.73■□□□□ 0.11
PNKP-203ENST00000593946 SOCS3O14543 225 aa15.73■□□□□ 0.11
PNKP-203ENST00000593946 HLA-DMBP28068 263 aa15.73■□□□□ 0.11
PNKP-203ENST00000593946 GOLT1AQ6ZVE7 132 aa15.73■□□□□ 0.11
PNKP-203ENST00000593946 FMC1Q96HJ9 113 aa15.73■□□□□ 0.11
PNKP-203ENST00000593946 TENM1Q9UKZ4 2725 aa15.73■□□□□ 0.11
PNKP-203ENST00000593946 S100A9P06702 114 aaKnown RBP15.72■□□□□ 0.11
PNKP-203ENST00000593946 CSN1S1P47710 185 aa15.72■□□□□ 0.11
PNKP-203ENST00000593946 RPL11P62913 178 aaKnown RBP15.72■□□□□ 0.11
PNKP-203ENST00000593946 NDUFA11Q86Y39 141 aa15.72■□□□□ 0.11
PNKP-203ENST00000593946 OCC1Q8TAD7 63 aa15.72■□□□□ 0.11
PNKP-203ENST00000593946 RPS10P5Q9NQ39 176 aa15.72■□□□□ 0.11
PNKP-203ENST00000593946 PRELID1Q9Y255 219 aa15.72■□□□□ 0.11
PNKP-203ENST00000593946 UBE2G1P62253 170 aa15.71■□□□□ 0.11
PNKP-203ENST00000593946 RNF182Q8N6D2 247 aa15.71■□□□□ 0.11
PNKP-203ENST00000593946 AURKAIP1Q9NWT8 199 aaPredicted RBP15.71■□□□□ 0.11
PNKP-203ENST00000593946 CLEC5AQ9NY25 188 aa15.71■□□□□ 0.11
PNKP-203ENST00000593946 MLXQ9UH92 298 aa15.71■□□□□ 0.11
PNKP-203ENST00000593946 SELENOKQ9Y6D0 94 aa15.71■□□□□ 0.11
PNKP-203ENST00000593946 ATRQ13535 2644 aa15.71■□□□□ 0.11
PNKP-203ENST00000593946 SERTM2A0A1B0GWG4 89 aa15.71■□□□□ 0.1
PNKP-203ENST00000593946 IGLV2-11P01706 119 aa15.71■□□□□ 0.1
PNKP-203ENST00000593946 MRPL53Q96EL3 112 aaKnown RBP15.71■□□□□ 0.1
PNKP-203ENST00000593946 C16orf92Q96LL3 132 aa15.71■□□□□ 0.1
PNKP-203ENST00000593946 A0A087WWC5 75 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 TRAV8-1A0A0A6YYK1 113 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 K7EQM0 130 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 M0QZ24 198 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 IGLV2-8P01709 118 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 NSUN5P1Q3KNT7 163 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 LCN12Q6JVE5 192 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 TMEM75Q8N9X5 138 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 SGK494Q96LW2 274 aa15.7■□□□□ 0.1
PNKP-203ENST00000593946 ZNF705FA8MVS1 300 aaPredicted RBP15.69■□□□□ 0.1
PNKP-203ENST00000593946 K7EN84 100 aa15.69■□□□□ 0.1
PNKP-203ENST00000593946 CSN3P07498 182 aa15.69■□□□□ 0.1
PNKP-203ENST00000593946 ISOC2Q96AB3 205 aa15.69■□□□□ 0.1
PNKP-203ENST00000593946 IGKV3-7A0A075B6H7 116 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 TRBV6-1A0A0K0K1D8 114 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 TSPAN4O14817 238 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 LTAP01374 205 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 PRB4P10163 310 aaPredicted RBP15.68■□□□□ 0.1
PNKP-203ENST00000593946 BTN1A1Q13410 526 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 Q86TA4 180 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 BAGE2Q86Y30 109 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 DCANP1Q8TF63 244 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 PSG3Q16557 428 aa15.68■□□□□ 0.1
PNKP-203ENST00000593946 IGKV2-40A0A087WW87 121 aaPredicted RBP15.67■□□□□ 0.1
PNKP-203ENST00000593946 IGKV2D-40P01614 121 aaPredicted RBP15.67■□□□□ 0.1
PNKP-203ENST00000593946 RNF212Q495C1 297 aa15.67■□□□□ 0.1
PNKP-203ENST00000593946 SAMD13Q5VXD3 122 aa15.67■□□□□ 0.1
PNKP-203ENST00000593946 TMEM88Q6PEY1 159 aa15.67■□□□□ 0.1
PNKP-203ENST00000593946 SMIM12Q96EX1 92 aa15.67■□□□□ 0.1
PNKP-203ENST00000593946 C20orf173Q96LM9 149 aa15.67■□□□□ 0.1
PNKP-203ENST00000593946 MS4A6AQ9H2W1 248 aa15.67■□□□□ 0.1
PNKP-203ENST00000593946 DNASE2O00115 360 aaPredicted RBP15.66■□□□□ 0.1
PNKP-203ENST00000593946 OVOL1O14753 267 aa15.66■□□□□ 0.1
PNKP-203ENST00000593946 FLI1Q01543 452 aaPredicted RBP15.66■□□□□ 0.1
PNKP-203ENST00000593946 CBLN2Q8IUK8 224 aa15.66■□□□□ 0.1
PNKP-203ENST00000593946 MLST8Q9BVC4 326 aa15.66■□□□□ 0.1
PNKP-203ENST00000593946 PRAC2D3DTV9 90 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 GBGT1Q8N5D6 347 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 NHLRC2Q8NBF2 726 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 PSG8Q9UQ74 426 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 RBAKDNA6NC62 111 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 GCGP01275 180 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 MT-ND4LP03901 98 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 PRNTQ86SH4 94 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 TMEM242Q9NWH2 141 aa15.65■□□□□ 0.1
PNKP-203ENST00000593946 FBLL1A6NHQ2 334 aaKnown RBP15.64■□□□□ 0.09
PNKP-203ENST00000593946 OR5I1Q13606 314 aa15.64■□□□□ 0.09
PNKP-203ENST00000593946 SFRP2Q96HF1 295 aa15.64■□□□□ 0.09
PNKP-203ENST00000593946 CITED1Q99966 193 aa15.64■□□□□ 0.09
PNKP-203ENST00000593946 VGLL1Q99990 258 aa15.64■□□□□ 0.09
PNKP-203ENST00000593946 CTDSP1Q9GZU7 261 aa15.64■□□□□ 0.09
PNKP-203ENST00000593946 SIGLEC8Q9NYZ4 499 aa15.64■□□□□ 0.09
PNKP-203ENST00000593946 LOC105371267A0A1B0GV96 52 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 K7EQG2 157 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 MGST1P10620 155 aaKnown RBP15.63■□□□□ 0.09
PNKP-203ENST00000593946 SMCO4Q9NRQ5 59 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 ZFP30Q9Y2G7 519 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 SORL1Q92673 2214 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 ID1P41134 155 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 KRTAP24-1Q3LI83 254 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 TMEM183AQ8IXX5 376 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 ZNF738Q8NE65 137 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 DYNLRB2Q8TF09 96 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 ANAPC16Q96DE5 110 aa15.63■□□□□ 0.09
PNKP-203ENST00000593946 DEFB114Q30KQ6 69 aa15.62■□□□□ 0.09
PNKP-203ENST00000593946 WFDC3Q8IUB2 231 aa15.62■□□□□ 0.09
PNKP-203ENST00000593946 TMEM61Q8N0U2 210 aa15.61■□□□□ 0.09
PNKP-203ENST00000593946 TUBA4BQ9H853 241 aa15.61■□□□□ 0.09
PNKP-203ENST00000593946 TFPI2P48307 235 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 PAFAH1B2P68402 229 aa15.6■□□□□ 0.09
PNKP-203ENST00000593946 PRIMA1Q86XR5 153 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms