RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LAMA4Q16363 1823 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 TRPM1Q7Z4N2 1603 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 NCALDP61601 193 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 Q8IYB0 196 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 CLECL1Q8IZS7 167 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 PATE1Q8WXA2 126 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 GPER1Q99527 375 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 SLC25A21Q9BQT8 299 aaPredicted RBP0.87□□□□□ -2.27
SMAD4-207ENST00000589076 CDC42SE1Q9NRR8 79 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 N4BP2Q86UW6 1770 aaPredicted RBP0.87□□□□□ -2.27
SMAD4-207ENST00000589076 ADGBQ8N7X0 1667 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 PTPRFP10586 1907 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 APC2O95996 2303 aa0.87□□□□□ -2.27
SMAD4-207ENST00000589076 MYO18AQ92614 2054 aaKnown RBP0.87□□□□□ -2.27
SMAD4-207ENST00000589076 CECR2Q9BXF3 1484 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 EIF3AQ14152 1382 aaKnown RBP0.86□□□□□ -2.27
SMAD4-207ENST00000589076 ZZEF1O43149 2961 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 AIPO00170 330 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 CST8O60676 142 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 ATG12O94817 140 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 FAM74A1Q5RGS3 127 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 C2orf82Q6UX34 121 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 TEX37Q96LM6 180 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 PSTPIP2Q9H939 334 aa0.86□□□□□ -2.27
SMAD4-207ENST00000589076 ZCCHC6Q5VYS8 1495 aaKnown RBP0.86□□□□□ -2.27
SMAD4-207ENST00000589076 TCRBV4S1A1TA0A5B7 111 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 G3V2T6 193 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 TMEM256-PLSCR3K7ERE1 68 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 M0R378 163 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 BANF1O75531 89 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 NDUFC2O95298 119 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 TACC2O95359 2948 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 BASP1P80723 227 aaKnown RBP0.85□□□□□ -2.27
SMAD4-207ENST00000589076 HACD4Q5VWC8 232 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 UHRF1BP1Q6BDS2 1440 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 ST6GALNAC3Q8NDV1 305 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 OR2T35Q8NGX2 323 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 OR10K1Q8NGX5 313 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 YTHDC2Q9H6S0 1430 aaKnown RBP0.85□□□□□ -2.27
SMAD4-207ENST00000589076 STOML2Q9UJZ1 356 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 CHCHD2Q9Y6H1 151 aaPredicted RBP0.85□□□□□ -2.27
SMAD4-207ENST00000589076 LY96Q9Y6Y9 160 aa0.85□□□□□ -2.27
SMAD4-207ENST00000589076 CDK12Q9NYV4 1490 aaPredicted RBP0.85□□□□□ -2.27
SMAD4-207ENST00000589076 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
SMAD4-207ENST00000589076 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.27
SMAD4-207ENST00000589076 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 DYNLT3P51808 116 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 SCGB2B2Q4G0G5 96 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 C4orf22Q6V702 233 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 BORCS5Q969J3 196 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 TP53RKQ96S44 253 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 PRNDQ9UKY0 176 aa0.84□□□□□ -2.27
SMAD4-207ENST00000589076 TOP2BQ02880 1626 aa0.84□□□□□ -2.28
SMAD4-207ENST00000589076 CAMSAP2Q08AD1 1489 aa0.84□□□□□ -2.28
SMAD4-207ENST00000589076 CNTRLQ7Z7A1 2325 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 KIF13AQ9H1H9 1805 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 TRBV6-4A0A1B0GX49 114 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 DUXBA0A1W2PPF3 345 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 CCL16O15467 120 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 HLA-EP13747 358 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 DSCR4P56555 118 aaPredicted RBP0.83□□□□□ -2.28
SMAD4-207ENST00000589076 ROMO1P60602 79 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 AKR1C8PQ5T2L2 129 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 EIF5AL1Q6IS14 154 aaKnown RBP0.83□□□□□ -2.28
SMAD4-207ENST00000589076 OR5D14Q8NGL3 314 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 NPCDR1Q9BY65 106 aa0.83□□□□□ -2.28
SMAD4-207ENST00000589076 LYRM2Q9NU23 88 aaPredicted RBP0.83□□□□□ -2.28
SMAD4-207ENST00000589076 C17orf112F2Z3M2 114 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 H7C1C5 153 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 IFNA1P01562 189 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 APOA2P02652 100 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 ZNF25P17030 456 aaPredicted RBP0.82□□□□□ -2.28
SMAD4-207ENST00000589076 NFYBP25208 207 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 PHBP35232 272 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 LCN6P62502 163 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 RPL19P84098 196 aaKnown RBP0.82□□□□□ -2.28
SMAD4-207ENST00000589076 ZNF833PQ6ZTB9 187 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 TMED4Q7Z7H5 227 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 TMEM70Q9BUB7 260 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 OR2J1Q9GZK6 312 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 SH3BGRL3Q9H299 93 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 MED29Q9NX70 200 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 ORMDL1Q9P0S3 153 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 PCTPQ9UKL6 214 aa0.82□□□□□ -2.28
SMAD4-207ENST00000589076 UNC13CQ8NB66 2214 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 NISCHQ9Y2I1 1504 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 TRAV10A0A0B4J240 114 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 TLCD2A6NGC4 264 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 E7EUB6 86 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 CCL25O15444 150 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 DNAL4O96015 105 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 OR10J4P0C629 311 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 GNG5P63218 68 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 POU6F1Q14863 301 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 LINC00322Q6ZN03 302 aaPredicted RBP0.81□□□□□ -2.28
SMAD4-207ENST00000589076 IFT20Q8IY31 132 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 EXOC3-AS1Q8N2X6 119 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 OR13C6PQ8NH95 151 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 AP3S1Q92572 193 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 MUCL1Q96DR8 90 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms