RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 IGHV2OR16-5A0A0B4J2B6 119 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 IGLC7A0M8Q6 106 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM231BA6NCW3 169 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 C2orf70A6NJV1 201 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 F2Z2F3 143 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 UPK2O00526 184 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 CCL25O15444 150 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 CA2P00918 260 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 OR5AL1P0C617 328 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 DEFA4P12838 97 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 PMCHP20382 165 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 TSPOP30536 169 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 MYCNOSP40205 109 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 GABRA2P47869 451 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 KRTDAPP60985 99 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 RBX1P62877 108 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 ARG2P78540 354 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 RHOGP84095 191 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 PRCDQ00LT1 54 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 PSG5Q15238 335 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 SMIM21Q3B7S5 101 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 LRRC10Q5BKY1 277 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 CT45A1Q5HYN5 189 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 SAPCD1Q5SSQ6 148 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 IBA57Q5T440 356 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 SPATA31B1PQ5VZV4 182 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 STUMQ69YW2 141 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 PVRIGQ6DKI7 326 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF826PQ6ZT77 177 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 Q6ZT83 130 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 MIR17HGQ75NE6 70 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 ATP5L2Q7Z4Y8 100 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF738Q8NE65 137 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 OR1L8Q8NGR8 309 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 CT45A3Q8NHU0 189 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 BORCS7Q96B45 105 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM167A-AS1Q96KT0 104 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 NDFIP1Q9BT67 221 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 MS4A6AQ9H2W1 248 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 IFI27L2Q9H2X8 130 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF331Q9NQX6 463 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 CLEC5AQ9NY25 188 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 SOX21Q9Y651 276 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 PTPRBP23467 1997 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 YLPM1P49750 1951 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 COL27A1Q8IZC6 1860 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGKV1D-17A0A075B6S4 117 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGKV1OR2-108A0A075B7D4 117 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV3-43A0A0B4J1X8 118 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV3-16A0A0C4DH30 117 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV1-69-2A0A0G2JMI3 117 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 KBTBD11-OT1A0A1B0GTJ5 212 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 TEX50A0A1B0GTY4 177 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 A0A1B0GXF2 115 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM168BA1KXE4 195 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 RPL37AP8A6NKH3 93 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 DEFB108AA8MXU0 73 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 M0R1X1 148 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 TCF21O43680 179 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 FSTL3O95633 263 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHG4P01861 327 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV3-43DP0DP04 118 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 RNASE2P10153 161 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IGLL1P15814 213 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 USF1P22415 310 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 SRIP30626 198 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 SSTR5P35346 364 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 LEPP41159 167 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 TFPI2P48307 235 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 HNRNPA3P51991 378 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 FOXA3P55318 350 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 SLAQ13239 276 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 TNXAQ16473 311 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 C17orf58Q2M2W7 97 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 SPINK9Q5DT21 86 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 CENPWQ5EE01 88 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 EBLN2Q6P2I7 272 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 Q6ZN92 141 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 SPATA12Q7Z6I5 190 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 UBALD2Q8IYN6 164 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNRF1Q8ND25 227 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 NUP35Q8NFH5 326 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 OR9G4Q8NGQ1 327 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 CHCHD1Q96BP2 118 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF714Q96N38 554 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM103A1Q9BTL3 118 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 HES7Q9BYE0 225 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 RNASE7Q9H1E1 156 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 ST20Q9HBF5 79 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 ENY2Q9NPA8 101 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 IDI2-AS1Q9NZ38 188 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF492Q9P255 531 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 CLCF1Q9UBD9 225 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 OR51B2Q9Y5P1 312 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 GTF3C1Q12789 2109 aa2.86□□□□□ -1.95
SMCHD1-208ENST00000583344 EPG5Q9HCE0 2579 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 TRBV6-1A0A0K0K1D8 114 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 A8MWL6 223 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms