RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 PRM2P04554 102 aa15.78■□□□□ 0.12
CASC3-207ENST00000581849 AZU1P20160 251 aa15.78■□□□□ 0.12
CASC3-207ENST00000581849 FAM3BP58499 235 aaPredicted RBP15.78■□□□□ 0.12
CASC3-207ENST00000581849 ENKURQ8TC29 256 aa15.77■□□□□ 0.12
CASC3-207ENST00000581849 TMEM263Q8WUH6 116 aaKnown RBP15.77■□□□□ 0.12
CASC3-207ENST00000581849 MRPL53Q96EL3 112 aaKnown RBP15.77■□□□□ 0.12
CASC3-207ENST00000581849 TMEM14CQ9P0S9 112 aa15.77■□□□□ 0.12
CASC3-207ENST00000581849 TIMM8BQ9Y5J9 83 aaPredicted RBP15.77■□□□□ 0.12
CASC3-207ENST00000581849 DNAH17Q9UFH2 4485 aa15.76■□□□□ 0.11
CASC3-207ENST00000581849 SNRPCP09234 159 aaKnown RBP15.76■□□□□ 0.11
CASC3-207ENST00000581849 RNASE8Q8TDE3 154 aaKnown RBP15.76■□□□□ 0.11
CASC3-207ENST00000581849 FAT2Q9NYQ8 4349 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 TRAV5A0A0B4J249 113 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 CBY3A6NI87 242 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 PRAC2D3DTV9 90 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 H3BTX0 84 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 UPK1BO75841 260 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 ATP5G1P05496 136 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 DEFB130BP0DP73 79 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 DEFB130AP0DP74 79 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 FGF7P21781 194 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 ATP5G3P48201 142 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 DNAH2Q9P225 4427 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 HERC2O95714 4834 aa15.75■□□□□ 0.11
CASC3-207ENST00000581849 NPIPB6E9PJ23 425 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 PRAF2O60831 178 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 PDE6HQ13956 83 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 Q6ZR54 194 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 NMES1Q9C002 83 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 SLC25A31Q9H0C2 315 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 ZNF586Q9NXT0 402 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 PRELID1Q9Y255 219 aa15.74■□□□□ 0.11
CASC3-207ENST00000581849 NACAE9PAV3 2078 aa15.73■□□□□ 0.11
CASC3-207ENST00000581849 TRBV19A0A075B6N1 114 aa15.73■□□□□ 0.11
CASC3-207ENST00000581849 RLN2P04090 185 aa15.73■□□□□ 0.11
CASC3-207ENST00000581849 HIST1H1EP10412 219 aaKnown RBP15.73■□□□□ 0.11
CASC3-207ENST00000581849 LEPP41159 167 aa15.73■□□□□ 0.11
CASC3-207ENST00000581849 GFI1BQ5VTD9 330 aa15.73■□□□□ 0.11
CASC3-207ENST00000581849 NPCDR1Q9BY65 106 aa15.73■□□□□ 0.11
CASC3-207ENST00000581849 E5RGE8 158 aa15.72■□□□□ 0.11
CASC3-207ENST00000581849 CYCSP99999 105 aaKnown RBP15.72■□□□□ 0.11
CASC3-207ENST00000581849 CCDC28AQ8IWP9 274 aa15.72■□□□□ 0.11
CASC3-207ENST00000581849 A0A1B0GVY2 172 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 F5H768 121 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 M0R2N4 97 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 RTL8CO15255 209 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 PRB4P10163 310 aaPredicted RBP15.71■□□□□ 0.11
CASC3-207ENST00000581849 HTN1P15515 57 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 FCN2Q15485 313 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 LINC00612Q8N6U2 182 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 KCNIP2Q9NS61 270 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 PTTG2Q9NZH5 202 aa15.71■□□□□ 0.11
CASC3-207ENST00000581849 A6NHS1 94 aa15.7■□□□□ 0.1
CASC3-207ENST00000581849 CT45A10P0DMU9 189 aa15.7■□□□□ 0.1
CASC3-207ENST00000581849 KIR3DS1Q14943 382 aa15.7■□□□□ 0.1
CASC3-207ENST00000581849 OR5C1Q8NGR4 320 aa15.7■□□□□ 0.1
CASC3-207ENST00000581849 PYGO2Q9BRQ0 406 aa15.7■□□□□ 0.1
CASC3-207ENST00000581849 PRSS29PA6NIE9 313 aa15.69■□□□□ 0.1
CASC3-207ENST00000581849 NHLH2Q02577 135 aa15.69■□□□□ 0.1
CASC3-207ENST00000581849 SOHLH1Q5JUK2 328 aa15.69■□□□□ 0.1
CASC3-207ENST00000581849 PARD6GQ9BYG4 376 aaPredicted RBP15.69■□□□□ 0.1
CASC3-207ENST00000581849 NOP10Q9NPE3 64 aaKnown RBP15.69■□□□□ 0.1
CASC3-207ENST00000581849 IGLV2-18A0A075B6J9 118 aa15.68■□□□□ 0.1
CASC3-207ENST00000581849 INMT-MINDY4F8WBC2 141 aa15.68■□□□□ 0.1
CASC3-207ENST00000581849 NDUFB4O95168 129 aa15.68■□□□□ 0.1
CASC3-207ENST00000581849 SLC25A5P05141 298 aaKnown RBP15.68■□□□□ 0.1
CASC3-207ENST00000581849 ATG101Q9BSB4 218 aa15.68■□□□□ 0.1
CASC3-207ENST00000581849 TIMM9Q9Y5J7 89 aa15.68■□□□□ 0.1
CASC3-207ENST00000581849 SIX6O95475 246 aa15.67■□□□□ 0.1
CASC3-207ENST00000581849 IFITM3Q01628 133 aa15.67■□□□□ 0.1
CASC3-207ENST00000581849 LINC00477Q96M19 166 aa15.67■□□□□ 0.1
CASC3-207ENST00000581849 MARVELD1Q9BSK0 173 aa15.67■□□□□ 0.1
CASC3-207ENST00000581849 AAMDCQ9H7C9 122 aa15.67■□□□□ 0.1
CASC3-207ENST00000581849 OR5AC2Q9NZP5 309 aa15.67■□□□□ 0.1
CASC3-207ENST00000581849 SNURFLB1AK76 121 aa15.66■□□□□ 0.1
CASC3-207ENST00000581849 M0R3E3 92 aa15.66■□□□□ 0.1
CASC3-207ENST00000581849 THAP6Q8TBB0 222 aa15.66■□□□□ 0.1
CASC3-207ENST00000581849 SLC25A2Q9BXI2 301 aa15.66■□□□□ 0.1
CASC3-207ENST00000581849 MRPL32Q9BYC8 188 aaKnown RBP15.66■□□□□ 0.1
CASC3-207ENST00000581849 WDR61Q9GZS3 305 aaKnown RBP15.66■□□□□ 0.1
CASC3-207ENST00000581849 TRAV12-3A0A0B4J271 114 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 KLLNB2CW77 178 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 H0YIZ8 118 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 NMBP08949 121 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 PYYP10082 97 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 LRRC37A5PQ49AS3 106 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 GCSAMLQ5JQS6 135 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 FAM167A-AS1Q96KT0 104 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 FAM19A4Q96LR4 140 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 LINC00467Q9BRT7 94 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 KIAA1109Q2LD37 5005 aa15.65■□□□□ 0.1
CASC3-207ENST00000581849 C7orf71A4D174 169 aa15.64■□□□□ 0.09
CASC3-207ENST00000581849 NUDT3O95989 172 aa15.64■□□□□ 0.09
CASC3-207ENST00000581849 CCL18P55774 89 aa15.64■□□□□ 0.09
CASC3-207ENST00000581849 DAZ2Q13117 558 aaKnown RBP15.64■□□□□ 0.09
CASC3-207ENST00000581849 C9orf47Q6ZRZ4 202 aa15.64■□□□□ 0.09
CASC3-207ENST00000581849 RNF141Q8WVD5 230 aa15.64■□□□□ 0.09
CASC3-207ENST00000581849 ZNF503Q96F45 646 aa15.64■□□□□ 0.09
CASC3-207ENST00000581849 PKHD1P08F94 4074 aa15.63■□□□□ 0.09
CASC3-207ENST00000581849 C17orf112F2Z3M2 114 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms