RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 BTF3L4Q96K17 158 aa11.22□□□□□ -0.61
MKS1-211ENST00000581761 SRD5A3Q9H8P0 318 aa11.22□□□□□ -0.61
MKS1-211ENST00000581761 SERTAD4Q9NUC0 356 aa11.22□□□□□ -0.61
MKS1-211ENST00000581761 TRAV8-1A0A0A6YYK1 113 aa11.21□□□□□ -0.61
MKS1-211ENST00000581761 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.61
MKS1-211ENST00000581761 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
MKS1-211ENST00000581761 FAM231DQ6ZW35 169 aa11.21□□□□□ -0.61
MKS1-211ENST00000581761 GRAMD2BQ96HH9 432 aa11.21□□□□□ -0.61
MKS1-211ENST00000581761 BIN3Q9NQY0 253 aa11.21□□□□□ -0.61
MKS1-211ENST00000581761 PSG8Q9UQ74 426 aa11.21□□□□□ -0.61
MKS1-211ENST00000581761 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 ZNF320A2RRD8 509 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 DNAJC9-AS1A6NH13 148 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 IGLV2-11P01706 119 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
MKS1-211ENST00000581761 MEOX2P50222 304 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 PSG3Q16557 428 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 ZNF331Q9NQX6 463 aaPredicted RBP11.2□□□□□ -0.62
MKS1-211ENST00000581761 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
MKS1-211ENST00000581761 ANK2Q01484 3957 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 A0A1W2PS18 150 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 TRGC2P03986 189 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 TYMSP04818 313 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 FAM106AQ4KMX7 169 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 NUDT10Q8NFP7 164 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 NUDT11Q96G61 164 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
MKS1-211ENST00000581761 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
MKS1-211ENST00000581761 CHEK1O14757 476 aa11.18□□□□□ -0.62
MKS1-211ENST00000581761 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
MKS1-211ENST00000581761 LGALS1P09382 135 aaKnown RBP11.18□□□□□ -0.62
MKS1-211ENST00000581761 SCGB2A2Q13296 93 aa11.18□□□□□ -0.62
MKS1-211ENST00000581761 GBGT1Q8N5D6 347 aa11.18□□□□□ -0.62
MKS1-211ENST00000581761 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
MKS1-211ENST00000581761 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
MKS1-211ENST00000581761 ZFP30Q9Y2G7 519 aa11.18□□□□□ -0.62
MKS1-211ENST00000581761 IGHV7-4-1A0A0J9YVY3 117 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 S100A6P06703 90 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 TCL1AP56279 114 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
MKS1-211ENST00000581761 TM4SF20Q53R12 229 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 LCN12Q6JVE5 192 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 Q6ZSV7 163 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 GPHB5Q86YW7 130 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
MKS1-211ENST00000581761 DAZAP1Q96EP5 407 aaKnown RBP11.17□□□□□ -0.62
MKS1-211ENST00000581761 SAV1Q9H4B6 383 aaPredicted RBP11.17□□□□□ -0.62
MKS1-211ENST00000581761 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
MKS1-211ENST00000581761 ZNF705FA8MVS1 300 aaPredicted RBP11.16□□□□□ -0.62
MKS1-211ENST00000581761 K7EMT4 169 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 SPATA3Q8NHX4 192 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 ASCL2Q99929 193 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 DAZ1Q9NQZ3 744 aaKnown RBP11.16□□□□□ -0.62
MKS1-211ENST00000581761 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
MKS1-211ENST00000581761 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 A0A087WW49 117 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 SMIM27A0A1W2PRY6 76 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
MKS1-211ENST00000581761 P01737 135 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 LINC00322Q6ZN03 302 aaPredicted RBP11.15□□□□□ -0.62
MKS1-211ENST00000581761 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 KLHDC1Q8N7A1 406 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 FRZBQ92765 325 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 MRPL53Q96EL3 112 aaKnown RBP11.15□□□□□ -0.62
MKS1-211ENST00000581761 C16orf92Q96LL3 132 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 RHPN1-AS1Q9BWJ2 59 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 RPP21Q9H633 154 aaKnown RBP11.15□□□□□ -0.62
MKS1-211ENST00000581761 ESM1Q9NQ30 184 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 SMPXQ9UHP9 88 aa11.15□□□□□ -0.62
MKS1-211ENST00000581761 FBN3Q75N90 2809 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 IZUMO1RA6ND01 250 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 PRAC2D3DTV9 90 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 SNRPEP62304 92 aaKnown RBP11.14□□□□□ -0.63
MKS1-211ENST00000581761 RPL19P84098 196 aaKnown RBP11.14□□□□□ -0.63
MKS1-211ENST00000581761 ACTL10Q5JWF8 245 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 VGLL1Q99990 258 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 CLEC5AQ9NY25 188 aa11.14□□□□□ -0.63
MKS1-211ENST00000581761 PHOX2AO14813 284 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 BMI1P35226 326 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms