RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 IGLV3-1P01715 115 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 APOA2P02652 100 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 CRHP06850 196 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 COX7CP15954 63 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 HOXA6P31267 233 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PHBP35232 272 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 TMBIM6P55061 237 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 ARF6P62330 175 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 LCN6P62502 163 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 GNG5P63218 68 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 AKR1C8PQ5T2L2 129 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 HACD4Q5VWC8 232 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 KRTAP26-1Q6PEX3 210 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 DHRS4L2Q6PKH6 230 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PATE2Q6UY27 113 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 GRINAQ7Z429 371 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 EXOC3-AS1Q8N2X6 119 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PPTC7Q8NI37 304 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 Q8TAT8 98 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PSMF1Q92530 271 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 POP5Q969H6 163 aaKnown RBP0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 RAB37Q96AX2 223 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 CHCHD1Q96BP2 118 aaKnown RBP0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 ZHX1-C8orf76Q96EF9 292 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 ZNF714Q96N38 554 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 SMR3AQ99954 134 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PBDC1Q9BVG4 233 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 GGACTQ9BVM4 153 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 MED29Q9NX70 200 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 PRNDQ9UKY0 176 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 SSR3Q9UNL2 185 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 BOD1L1Q8NFC6 3051 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 NBEAL1Q6ZS30 2694 aa0.25□□□□□ -2.37
SMCHD1-207ENST00000581711 EP400Q96L91 3159 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 CFAP46Q8IYW2 2715 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 PHRF1Q9P1Y6 1649 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 CEP164Q9UPV0 1460 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 TRAV27A0A087WT01 109 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 RIIAD1A6NNX1 92 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 JMJD7-PLA2G4BH0Y9G9 81 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 IFNA1P01562 189 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 IFNA14P01570 189 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 IFNA4P05014 189 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 CXCL1P09341 107 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 OGNP20774 298 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 PPP1R2P41236 205 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 INSL3P51460 131 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 ARPP19P56211 112 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 BASP1P80723 227 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 KLRD1Q13241 179 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 SNCBQ16143 134 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 LINC00575Q6W349 94 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 ARPINQ7Z6K5 226 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 OR5AS1Q8N127 324 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 LRRC18Q8N456 261 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 OR10AG1Q8NH19 301 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 OR13C6PQ8NH95 151 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 MALSU1Q96EH3 234 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 HYLS1Q96M11 299 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 LYSMD1Q96S90 227 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 PAIP2Q9BPZ3 127 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 GINS3Q9BRX5 216 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 CCDC94Q9BW85 323 aaPredicted RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 OR2J1Q9GZK6 312 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 WFDC10AQ9H1F0 79 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 SH3BGRL3Q9H299 93 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 CACYBPQ9HB71 228 aaKnown RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 LYRM2Q9NU23 88 aaPredicted RBP0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 CSMD1Q96PZ7 3565 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 DNHD1Q96M86 4753 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
SMCHD1-207ENST00000581711 TGP01266 2768 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 RFX7Q2KHR2 1363 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 ZDBF2Q9HCK1 2354 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TRAV5A0A0B4J249 113 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 hDV103S1A0JD37 113 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 ODAMA1E959 279 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 K7ERJ3 54 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 RER1O15258 196 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 LYRM1O43325 122 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 HIST1H2BKO60814 126 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 PPYP01298 95 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 IGLV1-51P01701 117 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TRGC2P03986 189 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 HIST1H2BJP06899 126 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 VBP1P61758 197 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 RPL19P84098 196 aaKnown RBP0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 SPATA45Q537H7 98 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TMEM14EPQ6UXP3 125 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TMED4Q7Z7H5 227 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 OR10AC1Q8NH08 325 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 ZC2HC1AQ96GY0 325 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 GPX7Q96SL4 187 aaPredicted RBP0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 PRRT1Q99946 306 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 MAP1LC3BQ9GZQ8 125 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TCEAL2Q9H3H9 227 aaPredicted RBP0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 SS18L2Q9UHA2 77 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 HSPB8Q9UJY1 196 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 STOML2Q9UJZ1 356 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms