RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 GZMBP10144 247 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 UBE2G2P60604 165 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 KLF5Q13887 457 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 NSUN5P1Q3KNT7 163 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 OR8I2Q8N0Y5 310 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 FXYD5Q96DB9 178 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 RAX2Q96IS3 184 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 LGALS9O00182 355 aa10.56□□□□□ -0.72
CDK5RAP3-219ENST00000580670 KRTAP24-1Q3LI83 254 aa10.56□□□□□ -0.72
CDK5RAP3-219ENST00000580670 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 CCL24O00175 119 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 PAGE4O60829 102 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 RPL7P18124 248 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 NDUFA11Q86Y39 141 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 OR4F17Q8NGA8 305 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 OR4F4Q96R69 305 aa10.55□□□□□ -0.72
CDK5RAP3-219ENST00000580670 A0A1W2PS18 150 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 MRPS12O15235 138 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TYMSP04818 313 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 NBEAP1P0C6P0 100 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 RPL23P62829 140 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 CST9LP1Q5W188 147 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ANAPC16Q96DE5 110 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 GRAMD2BQ96HH9 432 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 SMIM7Q9BQ49 75 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 YTHDF2Q9Y5A9 579 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ATRQ13535 2644 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 H3BTX0 84 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 IGLC2P0DOY2 106 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 EDN2P20800 178 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 FAM3BP58499 235 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 RAB4BP61018 213 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 FHL3Q13643 280 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ZNF664Q8N3J9 261 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 GPR82Q96P67 336 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 NDUFAF3Q9BU61 184 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 RHPN1-AS1Q9BWJ2 59 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ZNF586Q9NXT0 402 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 SMPXQ9UHP9 88 aa10.54□□□□□ -0.72
CDK5RAP3-219ENST00000580670 GALR1P47211 349 aa10.53□□□□□ -0.72
CDK5RAP3-219ENST00000580670 C2orf70A6NJV1 201 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 C11orf94C9JXX5 98 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 CHEK1O14757 476 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ADIRFQ15847 76 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 GLMPQ8WWB7 406 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 PEMTQ9UBM1 199 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 ARL2-SNX15V9GYD0 113 aa10.52□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 A0A1W2PRE2 83 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 XKRY2A2RUG3 117 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 H7BYZ3 331 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 BMI1P35226 326 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 ATP5G3P48201 142 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 RANP62826 216 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 SIGLEC15Q6ZMC9 328 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 OR9G4Q8NGQ1 327 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 C17orf77Q96MU5 243 aa10.52□□□□□ -0.73
CDK5RAP3-219ENST00000580670 CBLN1P23435 193 aa10.51□□□□□ -0.73
CDK5RAP3-219ENST00000580670 MYCNOSP40205 109 aa10.51□□□□□ -0.73
CDK5RAP3-219ENST00000580670 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
CDK5RAP3-219ENST00000580670 CITED1Q99966 193 aa10.51□□□□□ -0.73
CDK5RAP3-219ENST00000580670 ELOVL1Q9BW60 279 aa10.51□□□□□ -0.73
CDK5RAP3-219ENST00000580670 PARLQ9H300 379 aa10.51□□□□□ -0.73
CDK5RAP3-219ENST00000580670 GGTLC3B5MD39 225 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 TMEM18Q96B42 140 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 NEU1Q99519 415 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 SELENOKQ9Y6D0 94 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
CDK5RAP3-219ENST00000580670 A0A087X0K7 114 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 M0QZ24 198 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 SLC17A3O00476 420 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 NDUFB4O95168 129 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 SUMO1P63165 101 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 PDE6HQ13956 83 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 ZNF124Q15973 351 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 Q9H3A6 140 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 TENM1Q9UKZ4 2725 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 HELTA6NFD8 242 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 OVOL1O14753 267 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
CDK5RAP3-219ENST00000580670 PGPA6NDG6 321 aa10.48□□□□□ -0.73
CDK5RAP3-219ENST00000580670 PDE6DO43924 150 aa10.48□□□□□ -0.73
CDK5RAP3-219ENST00000580670 CSN3P07498 182 aa10.48□□□□□ -0.73
CDK5RAP3-219ENST00000580670 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms