RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 RPL7P18124 248 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 RAB2AP61019 212 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 SNRPD3P62318 126 aaKnown RBP6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 FFAR4Q5NUL3 377 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 FAM78BQ5VT40 261 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 KIR2DL5AQ8N109 375 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 HSD17B11Q8NBQ5 300 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 OR1L4Q8NGR5 311 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 KIR2DL5BQ8NHK3 375 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 GATAD1Q8WUU5 269 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 GPR82Q96P67 336 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 PFDN5Q99471 154 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 SAV1Q9H4B6 383 aaPredicted RBP6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 CLEC5AQ9NY25 188 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 AGRNO00468 2067 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 A0A0J9YX75 114 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 ZNF705FA8MVS1 300 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 IFNA5P01569 189 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 CXCL2P19875 107 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 ATP6V0CP27449 155 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 FXYD7P58549 80 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 AMTNQ6UX39 209 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 SSX7Q7RTT5 188 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 BPIFA4PQ86YQ2 179 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 STHQ8IWL8 128 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 ZNF709Q8N972 641 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 CSNK1G2-AS1Q8NCQ2 148 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 RNF183Q96D59 192 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 FXYD5Q96DB9 178 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 ZNF331Q9NQX6 463 aaPredicted RBP6.88□□□□□ -1.31
NPLOC4-219ENST00000576713 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 A8MTW9 85 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 M0R3E3 92 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 TRIAP1O43715 76 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 OR10J4P0C629 311 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 ID1P41134 155 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 MEOX2P50222 304 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 APOC4P55056 127 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 Q6ZWC4 215 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 INO80EQ8NBZ0 244 aaPredicted RBP6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 SCGB1C1Q8TD33 95 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 HRH4Q9H3N8 390 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 TMEM14CQ9P0S9 112 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 FUT9Q9Y231 359 aa6.87□□□□□ -1.31
NPLOC4-219ENST00000576713 RYR2Q92736 4967 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 HMGB3O15347 200 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 SPRY2O43597 315 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 ZNF726P1Q15940 193 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 PSG3Q16557 428 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 LCN15Q6UWW0 184 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 Q8N1X5 172 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 EXOC3-AS1Q8N2X6 119 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 KCNRGQ8N5I3 272 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 OR4B1Q8NGF8 309 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 BLNKQ8WV28 456 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 TIMM9Q9Y5J7 89 aa6.86□□□□□ -1.31
NPLOC4-219ENST00000576713 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 UBE2CO00762 179 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 HIST1H1EP10412 219 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 ZNF266Q14584 549 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 RBMY1FQ15415 496 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 FAM122CQ6P4D5 195 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 ZNF738Q8NE65 137 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 OR2G3Q8NGZ4 309 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 RPUSD4Q96CM3 377 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 MRPL32Q9BYC8 188 aaKnown RBP6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 KCNIP2Q9NS61 270 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 XCL2Q9UBD3 114 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 TP53TG1Q9Y2A0 90 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 ALMS1Q8TCU4 4167 aa6.85□□□□□ -1.31
NPLOC4-219ENST00000576713 A0A0J9YWU9 116 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 M0R2Z0 102 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 DEFB4AO15263 64 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 PRM2P04554 102 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 SPP1P10451 314 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 M6PRP20645 277 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 S100A7P31151 101 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 MORN3Q6PF18 240 aaPredicted RBP6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 S100A7AQ86SG5 101 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 TCTE3Q8IZS6 198 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 OR8A1Q8NGG7 326 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms