RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NUDT11Q96G61 164 aa21.77■■□□□ 1.08
CTDNEP1-210ENST00000574322 SMIM27A0A1W2PRY6 76 aa21.76■■□□□ 1.07
CTDNEP1-210ENST00000574322 ZNF207O43670 478 aaKnown RBP21.76■■□□□ 1.07
CTDNEP1-210ENST00000574322 C10orf99Q6UWK7 81 aa21.76■■□□□ 1.07
CTDNEP1-210ENST00000574322 PSG8Q9UQ74 426 aa21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 C19orf71A6NCJ1 209 aa21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 C5orf52A6NGY3 159 aa21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 ZNF705GA8MUZ8 300 aaPredicted RBP21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 GATCO43716 136 aaKnown RBP21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 PRNTQ86SH4 94 aa21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 GPHB5Q86YW7 130 aa21.75■■□□□ 1.07
CTDNEP1-210ENST00000574322 IGHV3-66A0A0C4DH42 116 aa21.74■■□□□ 1.07
CTDNEP1-210ENST00000574322 GRAMD2BQ96HH9 432 aa21.74■■□□□ 1.07
CTDNEP1-210ENST00000574322 SERTAD4Q9NUC0 356 aa21.74■■□□□ 1.07
CTDNEP1-210ENST00000574322 K7EMT4 169 aa21.73■■□□□ 1.07
CTDNEP1-210ENST00000574322 S100A6P06703 90 aa21.73■■□□□ 1.07
CTDNEP1-210ENST00000574322 IGHV3OR16-13A0A075B7E8 117 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 IGHV3-74A0A0B4J1X5 117 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 A0A1W2PS18 150 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 FRZBQ92765 325 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 CHEK1O14757 476 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BKO60814 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 RPLP1P05386 114 aaKnown RBP21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BJP06899 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BOP23527 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BBP33778 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BDP58876 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BCP62807 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST2H2BEQ16778 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 CT83Q5H943 113 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 ACTL10Q5JWF8 245 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 COX8CQ7Z4L0 72 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BHQ93079 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 MRPL53Q96EL3 112 aaKnown RBP21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 UBE2E2Q96LR5 201 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BNQ99877 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 HIST1H2BMQ99879 126 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 CLEC5AQ9NY25 188 aa21.72■■□□□ 1.07
CTDNEP1-210ENST00000574322 IGHV3-49A0A0A0MS15 119 aa21.71■■□□□ 1.07
CTDNEP1-210ENST00000574322 FAM106AQ4KMX7 169 aa21.71■■□□□ 1.07
CTDNEP1-210ENST00000574322 PRR27Q6MZM9 219 aa21.71■■□□□ 1.07
CTDNEP1-210ENST00000574322 LINC00322Q6ZN03 302 aaPredicted RBP21.71■■□□□ 1.07
CTDNEP1-210ENST00000574322 LCN12Q6JVE5 192 aa21.7■■□□□ 1.06
CTDNEP1-210ENST00000574322 DUX5Q96PT3 197 aa21.7■■□□□ 1.06
CTDNEP1-210ENST00000574322 DAZ1Q9NQZ3 744 aaKnown RBP21.7■■□□□ 1.06
CTDNEP1-210ENST00000574322 NPIPB6E9PJ23 425 aa21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 LGALS1P09382 135 aaKnown RBP21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 SNRPEP62304 92 aaKnown RBP21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 RPL19P84098 196 aaKnown RBP21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 DNAJC9-AS1A6NH13 148 aa21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 TRGC1P0CF51 173 aa21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 C8orf86Q6ZUL3 223 aa21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 SAV1Q9H4B6 383 aaPredicted RBP21.69■■□□□ 1.06
CTDNEP1-210ENST00000574322 TRAV8-2A0A0B4J237 113 aa21.68■■□□□ 1.06
CTDNEP1-210ENST00000574322 IGHV7-4-1A0A0J9YVY3 117 aa21.68■■□□□ 1.06
CTDNEP1-210ENST00000574322 RBAKDNA6NC62 111 aa21.68■■□□□ 1.06
CTDNEP1-210ENST00000574322 TSKUQ8WUA8 353 aa21.68■■□□□ 1.06
CTDNEP1-210ENST00000574322 RPP21Q9H633 154 aaKnown RBP21.68■■□□□ 1.06
CTDNEP1-210ENST00000574322 UBE2CO00762 179 aa21.67■■□□□ 1.06
CTDNEP1-210ENST00000574322 HLA-DMBP28068 263 aa21.67■■□□□ 1.06
CTDNEP1-210ENST00000574322 P01737 135 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 IGFL4Q6B9Z1 124 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 OR4B1Q8NGF8 309 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 ZNF418Q8TF45 676 aaPredicted RBP21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 ZC2HC1AQ96GY0 325 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 IZUMO1RA6ND01 250 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 SAPCD1Q5SSQ6 148 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 GBGT1Q8N5D6 347 aa21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 DAZAP1Q96EP5 407 aaKnown RBP21.66■■□□□ 1.06
CTDNEP1-210ENST00000574322 IGKV2-40A0A087WW87 121 aaPredicted RBP21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 CA1P00915 261 aaPredicted RBP21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 IGKV2D-40P01614 121 aaPredicted RBP21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 COX19Q49B96 90 aa21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 LURAP1LQ8IV03 231 aa21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 SMPXQ9UHP9 88 aa21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 UFC1Q9Y3C8 167 aa21.65■■□□□ 1.06
CTDNEP1-210ENST00000574322 FAM231BA6NCW3 169 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 FAM181BA6NEQ2 426 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 ZNF705FA8MVS1 300 aaPredicted RBP21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 A8MWL6 223 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 TM4SF20Q53R12 229 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 RHPN1-AS1Q9BWJ2 59 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 GFRA4Q9GZZ7 299 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 NAT8BQ9UHF3 227 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 TRAPPC1Q9Y5R8 145 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 PRR25Q96S07 402 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 ESM1Q9NQ30 184 aa21.63■■□□□ 1.05
CTDNEP1-210ENST00000574322 NIPBLQ6KC79 2804 aaeCLIP21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 TCL1AP56279 114 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 FABP9Q0Z7S8 132 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 Q6ZSV7 163 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 REC114Q7Z4M0 266 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 RNF182Q8N6D2 247 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 KLHDC1Q8N7A1 406 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 VGLL1Q99990 258 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 GNB1LQ9BYB4 327 aa21.62■■□□□ 1.05
CTDNEP1-210ENST00000574322 LGALS9O00182 355 aa21.61■■□□□ 1.05
CTDNEP1-210ENST00000574322 SOCS3O14543 225 aa21.61■■□□□ 1.05
CTDNEP1-210ENST00000574322 RASL11AQ6T310 242 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms