RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ID1P41134 155 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
CCDC40-209ENST00000573474 TAS2R60P59551 318 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 PAFAH1B2P68402 229 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 PSG3Q16557 428 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 GUCA2BQ16661 112 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 DEFB114Q30KQ6 69 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 LCN12Q6JVE5 192 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 SVBPQ8N300 66 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 ZNF747Q9BV97 191 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 MS4A6AQ9H2W1 248 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 NAT8Q9UHE5 227 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 KLF12Q9Y4X4 402 aa10.32□□□□□ -0.76
CCDC40-209ENST00000573474 HLA-DMBP28068 263 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 TMEM183BQ1AE95 376 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 RBPMS2Q6ZRY4 209 aaKnown RBP10.31□□□□□ -0.76
CCDC40-209ENST00000573474 GOLT1AQ6ZVE7 132 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 GBGT1Q8N5D6 347 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 RNF182Q8N6D2 247 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 LINC00482Q8N8I6 264 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 DCANP1Q8TF63 244 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 TVP23CQ96ET8 276 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 FMC1Q96HJ9 113 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 SDF2L1Q9HCN8 221 aa10.31□□□□□ -0.76
CCDC40-209ENST00000573474 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 TRAV34A0A0B4J273 112 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 TRAV25A0A0B4J276 109 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 ZNF705FA8MVS1 300 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-209ENST00000573474 C9JCJ5 164 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 UBE2G1P62253 170 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 LY96Q9Y6Y9 160 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 ATRQ13535 2644 aa10.3□□□□□ -0.76
CCDC40-209ENST00000573474 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 K7EQG2 157 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 TSPAN4O14817 238 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 SNAPINO95295 136 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 TFPI2P48307 235 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 GNG4P50150 75 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-209ENST00000573474 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-209ENST00000573474 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 C12orf54Q6X4T0 127 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 ZNF738Q8NE65 137 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 C20orf173Q96LM9 149 aa10.29□□□□□ -0.76
CCDC40-209ENST00000573474 TRBV20OR9-2A0A075B6H5 130 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 RBAKDNA6NC62 111 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
CCDC40-209ENST00000573474 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 M0R036 132 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 SAP30O75446 220 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 SNRPD3P62318 126 aaKnown RBP10.28□□□□□ -0.76
CCDC40-209ENST00000573474 SHISA2Q6UWI4 295 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 BAGE2Q86Y30 109 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 TMEM61Q8N0U2 210 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 IGF2BP2-AS1Q96M15 143 aa10.28□□□□□ -0.76
CCDC40-209ENST00000573474 IGKV2-40A0A087WW87 121 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-209ENST00000573474 IGKV2D-40P01614 121 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-209ENST00000573474 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.77
CCDC40-209ENST00000573474 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-209ENST00000573474 ADIRFQ15847 76 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 OCC1Q8TAD7 63 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 SGK494Q96LW2 274 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-209ENST00000573474 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 TENM1Q9UKZ4 2725 aa10.27□□□□□ -0.77
CCDC40-209ENST00000573474 TRAV8-1A0A0A6YYK1 113 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 B4DEV8 164 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 LTAP01374 205 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 PRNTQ86SH4 94 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 Q86TA4 180 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 ZFP30Q9Y2G7 519 aa10.26□□□□□ -0.77
CCDC40-209ENST00000573474 PGPEP1LA6NFU8 196 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 IGLV1-51P01701 117 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 IGLV2-8P01709 118 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 ZNF688P0C7X2 276 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 PRB4P10163 310 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-209ENST00000573474 RHEBQ15382 184 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 ATRAIDQ6UW56 229 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 FAM24BQ8N5W8 94 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 OR10J6PQ8NGY7 276 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 VGLL1Q99990 258 aa10.25□□□□□ -0.77
CCDC40-209ENST00000573474 AURKAIP1Q9NWT8 199 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-209ENST00000573474 FBN1P35555 2871 aaKnown RBP10.24□□□□□ -0.77
CCDC40-209ENST00000573474 WNK1Q9H4A3 2382 aa10.24□□□□□ -0.77
CCDC40-209ENST00000573474 C7orf77A4D0Y5 90 aa10.24□□□□□ -0.77
CCDC40-209ENST00000573474 ERCC8Q13216 396 aa10.24□□□□□ -0.77
CCDC40-209ENST00000573474 PSMG4Q5JS54 123 aa10.24□□□□□ -0.77
CCDC40-209ENST00000573474 C9orf47Q6ZRZ4 202 aa10.24□□□□□ -0.77
CCDC40-209ENST00000573474 OR8A1Q8NGG7 326 aa10.24□□□□□ -0.77
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