RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 MBD3L5A6NJ08 208 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 B9A039 149 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 HAX1O00165 279 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 CTRLP40313 264 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 FAM71F2Q6NXP2 309 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 MBD3L2Q8NHZ7 208 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 FAM106CPP0CH98 169 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 RHOGP84095 191 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 EIF4EBP1Q13541 118 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 SP5Q6BEB4 398 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 TMEM158Q8WZ71 300 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 H3BRM9 83 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 LCNL1Q6ZST4 164 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 Q8N7P7 452 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 UBTD1Q9HAC8 227 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 TRBV19A0A075B6N1 114 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 FAM120AOSQ5T036 256 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 TMEM170BQ5T4T1 132 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 CLEC19AQ6UXS0 136 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 SHANK2-AS3Q9BTD1 123 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 SPG11Q96JI7 2443 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 TNRC18O15417 2968 aaPredicted RBP8.41□□□□□ -1.06
USB1-212ENST00000566082 LTAP01374 205 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 GATA4P43694 442 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 MSMPQ1L6U9 139 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 CHAC1Q9BUX1 264 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 WDFY3Q8IZQ1 3526 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 C22orf46C9J442 243 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 CCL21O00585 134 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 PRSS2P07478 247 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 FAM74A4Q5TZK3 123 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
USB1-212ENST00000566082 MRPL51Q4U2R6 128 aaKnown RBP8.4□□□□□ -1.06
USB1-212ENST00000566082 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 THAP8Q8NA92 274 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 ANKHD1Q8IWZ3 2542 aaKnown RBP8.4□□□□□ -1.06
USB1-212ENST00000566082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.4□□□□□ -1.06
USB1-212ENST00000566082 KLRD1Q13241 179 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 GAGE13Q4V321 117 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 ADAMTSL5Q6ZMM2 481 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 NCOR1P1Q9H4R4 102 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 BEX4Q9NWD9 120 aaPredicted RBP8.4□□□□□ -1.06
USB1-212ENST00000566082 DYSFO75923 2080 aa8.4□□□□□ -1.06
USB1-212ENST00000566082 BUB1B-PAK6H3BSN5 160 aa8.4□□□□□ -1.07
USB1-212ENST00000566082 LY6HO94772 140 aa8.4□□□□□ -1.07
USB1-212ENST00000566082 IGLC1P0CG04 106 aa8.4□□□□□ -1.07
USB1-212ENST00000566082 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.07
USB1-212ENST00000566082 DKK2Q9UBU2 259 aa8.4□□□□□ -1.07
USB1-212ENST00000566082 IGLV3-9A0A075B6K5 115 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 NPYP01303 97 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 PAX1P15863 534 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 TRAV40A0A0B4J280 105 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 K7ERJ3 54 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 TMEM75Q8N9X5 138 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 TNFRSF14Q92956 283 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 IGHV3OR16-10A0A075B7F0 116 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 K7EP34 96 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 RAB9AP51151 201 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 ETDBQ3ZM63 59 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 LYPD1Q8N2G4 141 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
USB1-212ENST00000566082 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 LOXP28300 417 aaPredicted RBP8.38□□□□□ -1.07
USB1-212ENST00000566082 SRSF1Q07955 248 aaKnown RBP eCLIP8.38□□□□□ -1.07
USB1-212ENST00000566082 ERCC8Q13216 396 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 GLMPQ8WWB7 406 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 RITA1Q96K30 269 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 PF4V1P10720 104 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 LGALS9BQ3B8N2 356 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 TMEM155Q4W5P6 130 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 KHDC1LQ5JSQ8 128 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 LGALS9CQ6DKI2 356 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 TMEM8BA6NDV4 472 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 LHBP01229 141 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 IGKV3-20P01619 116 aa8.38□□□□□ -1.07
USB1-212ENST00000566082 A0A1W2PNU3 283 aaPredicted RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 ZNF815PA8K554 130 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 GP9P14770 177 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 RPL13AP40429 203 aaKnown RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 RBX1P62877 108 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 CD300EQ496F6 205 aaPredicted RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 NEU4Q8WWR8 484 aaPredicted RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 HOXA3O43365 443 aaPredicted RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 LGALS3P17931 250 aaKnown RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 LAGE3Q14657 143 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 IGFBPL1Q8WX77 278 aa8.37□□□□□ -1.07
USB1-212ENST00000566082 CHTOPQ9Y3Y2 248 aaKnown RBP8.37□□□□□ -1.07
USB1-212ENST00000566082 A0A0G2JNJ9 132 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms