RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 GUCA2BQ16661 112 aa9.65□□□□□ -0.86
CLK3-214ENST00000564096 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
CLK3-214ENST00000564096 CYB561D1Q8N8Q1 229 aa9.65□□□□□ -0.86
CLK3-214ENST00000564096 ZNF738Q8NE65 137 aa9.65□□□□□ -0.86
CLK3-214ENST00000564096 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
CLK3-214ENST00000564096 SLC35B3Q9H1N7 401 aa9.65□□□□□ -0.86
CLK3-214ENST00000564096 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 FBLL1A6NHQ2 334 aaKnown RBP9.64□□□□□ -0.87
CLK3-214ENST00000564096 TCRAP04437 139 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 SFTA3P0C7M3 94 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 CEBPGP53567 150 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 UBE2G1P62253 170 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 PRR31Q5SQ13 230 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 CCDC28AQ8IWP9 274 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 WFDC9Q8NEX5 89 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 LINC00052Q96N35 136 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 CITED4Q96RK1 184 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 SELENOKQ9Y6D0 94 aa9.64□□□□□ -0.87
CLK3-214ENST00000564096 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
CLK3-214ENST00000564096 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
CLK3-214ENST00000564096 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
CLK3-214ENST00000564096 CMC4P56277 68 aaPredicted RBP9.63□□□□□ -0.87
CLK3-214ENST00000564096 PSG3Q16557 428 aa9.63□□□□□ -0.87
CLK3-214ENST00000564096 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
CLK3-214ENST00000564096 DIRC3C9JPN6 131 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 M0R3E3 92 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 GNG5P63218 68 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 SRSF3P84103 164 aaKnown RBP9.62□□□□□ -0.87
CLK3-214ENST00000564096 PSMG4Q5JS54 123 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 SOHLH1Q5JUK2 328 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 GOLT1AQ6ZVE7 132 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 MDFIQ99750 246 aa9.62□□□□□ -0.87
CLK3-214ENST00000564096 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
CLK3-214ENST00000564096 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 KRBOX1C9JBD0 128 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 IGFL4Q6B9Z1 124 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 SLC7A5P1Q8MH63 180 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 TMEM75Q8N9X5 138 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 C2CD4CQ8TF44 421 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 PARLQ9H300 379 aa9.61□□□□□ -0.87
CLK3-214ENST00000564096 FBN1P35555 2871 aaKnown RBP9.6□□□□□ -0.87
CLK3-214ENST00000564096 TMEM218A2RU14 115 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 F8W036 122 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 WIPF1O43516 503 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 RPL35P42766 123 aaKnown RBP9.6□□□□□ -0.87
CLK3-214ENST00000564096 TMEM78Q5T7P6 136 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 EBLN2Q6P2I7 272 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 GTSCR1Q86UQ5 136 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 C20orf173Q96LM9 149 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 SMIM7Q9BQ49 75 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 NIPSNAP3BQ9BS92 247 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 NDFIP1Q9BT67 221 aa9.6□□□□□ -0.87
CLK3-214ENST00000564096 IGKV2-40A0A087WW87 121 aaPredicted RBP9.59□□□□□ -0.87
CLK3-214ENST00000564096 IZUMO1RA6ND01 250 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 ZNF727A8MUV8 499 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 C9JQL5 133 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 IGKV2D-40P01614 121 aaPredicted RBP9.59□□□□□ -0.87
CLK3-214ENST00000564096 IGLL1P15814 213 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 GNG4P50150 75 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 TAS2R60P59551 318 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 HIST1H1AQ02539 215 aaPredicted RBP9.59□□□□□ -0.87
CLK3-214ENST00000564096 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 Q86TA4 180 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
CLK3-214ENST00000564096 ZNF256Q9Y2P7 627 aaPredicted RBP9.59□□□□□ -0.87
CLK3-214ENST00000564096 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 ZNF705FA8MVS1 300 aaPredicted RBP9.58□□□□□ -0.88
CLK3-214ENST00000564096 C9JCJ5 164 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 DUSP14O95147 198 aaKnown RBP9.58□□□□□ -0.88
CLK3-214ENST00000564096 DEFB131AP59861 70 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 FLI1Q01543 452 aaPredicted RBP9.58□□□□□ -0.88
CLK3-214ENST00000564096 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 SEC11CQ9BY50 192 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 WNK1Q9H4A3 2382 aa9.58□□□□□ -0.88
CLK3-214ENST00000564096 BEAN1Q3B7T3 259 aa9.57□□□□□ -0.88
CLK3-214ENST00000564096 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
CLK3-214ENST00000564096 SPATA3Q8NHX4 192 aa9.57□□□□□ -0.88
CLK3-214ENST00000564096 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
CLK3-214ENST00000564096 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
CLK3-214ENST00000564096 KLF12Q9Y4X4 402 aa9.57□□□□□ -0.88
CLK3-214ENST00000564096 NPIPB6E9PJ23 425 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 LTAP01374 205 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
CLK3-214ENST00000564096 ODF3L2Q3SX64 289 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 C9orf47Q6ZRZ4 202 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 PRNTQ86SH4 94 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms