RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
SPG7-209ENST00000564047 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
SPG7-209ENST00000564047 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
SPG7-209ENST00000564047 PARLQ9H300 379 aa9.76□□□□□ -0.85
SPG7-209ENST00000564047 SAV1Q9H4B6 383 aaPredicted RBP9.76□□□□□ -0.85
SPG7-209ENST00000564047 TMEM167BQ9NRX6 74 aa9.76□□□□□ -0.85
SPG7-209ENST00000564047 SMAD5-AS1Q9Y6J3 95 aa9.76□□□□□ -0.85
SPG7-209ENST00000564047 A0A087X0K7 114 aa9.75□□□□□ -0.85
SPG7-209ENST00000564047 OR10J4P0C629 311 aa9.75□□□□□ -0.85
SPG7-209ENST00000564047 MEOX2P50222 304 aa9.75□□□□□ -0.85
SPG7-209ENST00000564047 TCF24Q7RTU0 167 aa9.75□□□□□ -0.85
SPG7-209ENST00000564047 IQCF2Q8IXL9 164 aa9.75□□□□□ -0.85
SPG7-209ENST00000564047 DYNLRB2Q8TF09 96 aa9.75□□□□□ -0.85
SPG7-209ENST00000564047 ZNF785A8K8V0 405 aa9.74□□□□□ -0.85
SPG7-209ENST00000564047 NBEAP1P0C6P0 100 aa9.74□□□□□ -0.85
SPG7-209ENST00000564047 RPL23P62829 140 aaKnown RBP9.74□□□□□ -0.85
SPG7-209ENST00000564047 DEFB114Q30KQ6 69 aa9.74□□□□□ -0.85
SPG7-209ENST00000564047 ANAPC16Q96DE5 110 aa9.74□□□□□ -0.85
SPG7-209ENST00000564047 MCRIP2Q9BUT9 160 aaKnown RBP9.74□□□□□ -0.85
SPG7-209ENST00000564047 ZNF586Q9NXT0 402 aa9.74□□□□□ -0.85
SPG7-209ENST00000564047 RYR3Q15413 4870 aa9.74□□□□□ -0.85
SPG7-209ENST00000564047 TRBV19A0A075B6N1 114 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 TRBV24-1A0A075B6N3 115 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 C5orf52A6NGY3 159 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 ZNF253O75346 499 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 SAP30O75446 220 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 S100A6P06703 90 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 CD33P20138 364 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 INSL3P51460 131 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 PDE6HQ13956 83 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 OR2K2Q8NGT1 345 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 RPUSD4Q96CM3 377 aaKnown RBP9.73□□□□□ -0.85
SPG7-209ENST00000564047 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
SPG7-209ENST00000564047 UBE2CO00762 179 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 IGLV1-51P01701 117 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
SPG7-209ENST00000564047 ADIRFQ15847 76 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 ZNF674Q2M3X9 581 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 C9orf66Q5T8R8 295 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 SAMD13Q5VXD3 122 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 ZFP82Q8N141 532 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 C2CD4CQ8TF44 421 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 BLNKQ8WV28 456 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 C11orf52Q96A22 123 aa9.72□□□□□ -0.85
SPG7-209ENST00000564047 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 A0A1W2PRE2 83 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 PPP1R2P9O14990 202 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 NDUFB4O95168 129 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 SNRPCP09234 159 aaKnown RBP9.71□□□□□ -0.86
SPG7-209ENST00000564047 CXCL1P09341 107 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 RPS10P46783 165 aaKnown RBP9.71□□□□□ -0.86
SPG7-209ENST00000564047 ATP5G3P48201 142 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 PAFAH1B2P68402 229 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 CD300EQ496F6 205 aaPredicted RBP9.71□□□□□ -0.86
SPG7-209ENST00000564047 RBPMS2Q6ZRY4 209 aaKnown RBP9.71□□□□□ -0.86
SPG7-209ENST00000564047 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 LINC00518Q8N0U6 118 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 LYPD1Q8N2G4 141 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 SLC50A1Q9BRV3 221 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 SELENOKQ9Y6D0 94 aa9.71□□□□□ -0.86
SPG7-209ENST00000564047 IGKV3-7A0A075B6H7 116 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 H3BTX0 84 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 H7BYZ3 331 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 S100A8P05109 93 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 S100PP25815 95 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 PSG9Q00887 426 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 CST9LP1Q5W188 147 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 DCANP1Q8TF63 244 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 BTF3L4Q96K17 158 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 FAM210BQ96KR6 192 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 MS4A6AQ9H2W1 248 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 ZNF331Q9NQX6 463 aaPredicted RBP9.7□□□□□ -0.86
SPG7-209ENST00000564047 LY96Q9Y6Y9 160 aa9.7□□□□□ -0.86
SPG7-209ENST00000564047 TGIF2-C20orf24A0A0A6YYL0 155 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 SLC17A3O00476 420 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 SOCS3O14543 225 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
SPG7-209ENST00000564047 UBE2G2P60604 165 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
SPG7-209ENST00000564047 RANP62826 216 aaKnown RBP9.69□□□□□ -0.86
SPG7-209ENST00000564047 GBGT1Q8N5D6 347 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 IMMP2LQ96T52 175 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 SPAG8Q99932 426 aaPredicted RBP9.69□□□□□ -0.86
SPG7-209ENST00000564047 TCEAL7Q9BRU2 100 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 GPR61Q9BZJ8 451 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 CLEC5AQ9NY25 188 aa9.69□□□□□ -0.86
SPG7-209ENST00000564047 YTHDF2Q9Y5A9 579 aaKnown RBP9.69□□□□□ -0.86
SPG7-209ENST00000564047 TRAV8-2A0A0B4J237 113 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 C9JCJ5 164 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 K7EQG2 157 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 ISLRO14498 428 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 LCN12Q6JVE5 192 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 Q9H3A6 140 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 AAMDCQ9H7C9 122 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms