RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 PEX7O00628 323 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 TCRAP04437 139 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 ZNF674Q2M3X9 581 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 CMTM2Q8TAZ6 248 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 DYNLRB2Q8TF09 96 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 HIST1H2BAQ96A08 127 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 C20orf173Q96LM9 149 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 TCEAL7Q9BRU2 100 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 CARHSP1Q9Y2V2 147 aaKnown RBP7.64□□□□□ -1.19
SMG1-208ENST00000563448 FBN1P35555 2871 aaKnown RBP7.64□□□□□ -1.19
SMG1-208ENST00000563448 DIRC3C9JPN6 131 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 RIPPLY3P57055 190 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 C12orf54Q6X4T0 127 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 C3orf56Q8N813 242 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 SPATA3Q8NHX4 192 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 LINC00479Q96M42 142 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 ATG101Q9BSB4 218 aa7.64□□□□□ -1.19
SMG1-208ENST00000563448 SORL1Q92673 2214 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 ZNF727A8MUV8 499 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 K7EQG2 157 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 AKR1C3P42330 323 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 RPL35P42766 123 aaKnown RBP7.63□□□□□ -1.19
SMG1-208ENST00000563448 TFPI2P48307 235 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 PSG3Q16557 428 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 CD300EQ496F6 205 aaPredicted RBP7.63□□□□□ -1.19
SMG1-208ENST00000563448 LCN12Q6JVE5 192 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 TMEM61Q8N0U2 210 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 FAM24BQ8N5W8 94 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 SMIM7Q9BQ49 75 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 AGRNO00468 2067 aa7.63□□□□□ -1.19
SMG1-208ENST00000563448 TRAV34A0A0B4J273 112 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 IZUMO1RA6ND01 250 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 PRAC2D3DTV9 90 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 DNASE2O00115 360 aaPredicted RBP7.62□□□□□ -1.19
SMG1-208ENST00000563448 ISLRO14498 428 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 SAP30O75446 220 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 APOC3P02656 99 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 GUCA2BQ16661 112 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 RBPMS2Q6ZRY4 209 aaKnown RBP7.62□□□□□ -1.19
SMG1-208ENST00000563448 GOLT1AQ6ZVE7 132 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 ARL6IP6Q8N6S5 226 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 SGK494Q96LW2 274 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 TRBV20OR9-2A0A075B6H5 130 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 CSN1S1P47710 185 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 CNN1P51911 297 aaKnown RBP7.62□□□□□ -1.19
SMG1-208ENST00000563448 FAM74A3Q4VXF1 159 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
SMG1-208ENST00000563448 CLEC5AQ9NY25 188 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 KLF12Q9Y4X4 402 aa7.62□□□□□ -1.19
SMG1-208ENST00000563448 IGKV2-40A0A087WW87 121 aaPredicted RBP7.61□□□□□ -1.19
SMG1-208ENST00000563448 TRAV8-1A0A0A6YYK1 113 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 PGPEP1LA6NFU8 196 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 IGKV2D-40P01614 121 aaPredicted RBP7.61□□□□□ -1.19
SMG1-208ENST00000563448 IGLV1-51P01701 117 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 IGLV2-11P01706 119 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 ID1P41134 155 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 TAS2R60P59551 318 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 PAFAH1B2P68402 229 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 TMEM183BQ1AE95 376 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 SHISA2Q6UWI4 295 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 IGF2BP2-AS1Q96M15 143 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 NIPSNAP3BQ9BS92 247 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 SDF2L1Q9HCN8 221 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 TRAV2A0A0B4J234 112 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 C9JCJ5 164 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 DEFB1P60022 68 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 TMEM241Q24JQ0 296 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 SAMD13Q5VXD3 122 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 TMEM75Q8N9X5 138 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 ZNF738Q8NE65 137 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 FMC1Q96HJ9 113 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 NAT8Q9UHE5 227 aa7.61□□□□□ -1.19
SMG1-208ENST00000563448 SERTM2A0A1B0GWG4 89 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 IGLV2-8P01709 118 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 ZNF688P0C7X2 276 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 UBE2G1P62253 170 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 RPL23P62829 140 aaKnown RBP7.6□□□□□ -1.19
SMG1-208ENST00000563448 CENPWQ5EE01 88 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 OCC1Q8TAD7 63 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 TVP23CQ96ET8 276 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 VGLL1Q99990 258 aa7.6□□□□□ -1.19
SMG1-208ENST00000563448 ZNF256Q9Y2P7 627 aaPredicted RBP7.6□□□□□ -1.19
SMG1-208ENST00000563448 K7EQM0 130 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 S100A9P06702 114 aaKnown RBP7.59□□□□□ -1.19
SMG1-208ENST00000563448 GNG4P50150 75 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 ERCC8Q13216 396 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 OR2K2Q8NGT1 345 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 ASCL2Q99929 193 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
SMG1-208ENST00000563448 AURKAIP1Q9NWT8 199 aaPredicted RBP7.59□□□□□ -1.19
SMG1-208ENST00000563448 PSG8Q9UQ74 426 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 TRBV6-1A0A0K0K1D8 114 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 RBAKDNA6NC62 111 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 F6UB75 175 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 ZNF705DP0CH99 300 aaPredicted RBP7.59□□□□□ -1.19
SMG1-208ENST00000563448 ZNF705BP0CI00 300 aaPredicted RBP7.59□□□□□ -1.19
SMG1-208ENST00000563448 PSMG4Q5JS54 123 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 ATRAIDQ6UW56 229 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms