RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 AIPO00170 330 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 SLC22A1O15245 554 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 GSTZ1O43708 216 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 LTAP01374 205 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 RBP4P02753 201 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 UCHL1P09936 223 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF25P17030 456 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 MPV17P39210 176 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 NMUP48645 174 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 CMC4P56277 68 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 CAV3P56539 151 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 SLC25A29Q8N8R3 303 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ZDHHC22Q8N966 263 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 OR13C8Q8NGS7 320 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 OR5H2Q8NGV7 314 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF418Q8TF45 676 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 MALSU1Q96EH3 234 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 TMEM70Q9BUB7 260 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 COMMD5Q9GZQ3 224 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 NDUFB11Q9NX14 153 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 AMMECR1Q9Y4X0 333 aaPredicted RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 ALPK2Q86TB3 2170 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 LAMA5O15230 3695 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 PRRC2CQ9Y520 2896 aaKnown RBP3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 DOPEY2Q9Y3R5 2298 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 FREM1Q5H8C1 2179 aa3.66□□□□□ -1.82
VPS35P1-201ENST00000563400 MEIKINA0A087WXM9 373 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 IGHV3-72A0A0B4J1Y9 119 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 CXorf1O96002 111 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 IGLV3-1P01715 115 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 MAS1P04201 325 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 MSMBP08118 114 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 RAB13P51153 203 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 TMBIM6P55061 237 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 FGF12P61328 243 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 HIST1H1AQ02539 215 aaPredicted RBP3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 DNLZQ5SXM8 178 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 Q6ZS49 121 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 SLC25A26Q70HW3 274 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 TRAPPC6BQ86SZ2 158 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 ZNF525Q8N782 197 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 KLHL30-AS1Q8NEE0 82 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 OR4K15Q8NH41 348 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 SGMS2Q8NHU3 365 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 AQP3Q92482 292 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 SMIM3Q9BZL3 60 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 BPESC1Q9GZL8 116 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 C8orf17Q9NRJ1 99 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 DSCAMO60469 2012 aa3.65□□□□□ -1.82
VPS35P1-201ENST00000563400 ITPR1Q14643 2758 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 ZZEF1O43149 2961 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 BORCS7-ASMTA0A0B4J1R7 106 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 IGKV1-12A0A0C4DH73 117 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 DUXBA0A1W2PPF3 345 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 M0R1W7 72 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 LHBP01229 141 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 IGKV1D-12P01611 117 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 CRISP2P16562 243 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 COL8A2P25067 703 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 NPY1RP25929 384 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 SRIP30626 198 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 BRS3P32247 399 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 SDC2P34741 201 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TGFBR1P36897 503 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 MRPS10P82664 201 aaKnown RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 DEFB108BQ8NET1 73 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 OR51T1Q8NGJ9 327 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 OR4A5Q8NH83 315 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 RPS4Y2Q8TD47 263 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TMEM158Q8WZ71 300 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 H1FXQ92522 213 aaKnown RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 ADAT3Q96EY9 351 aaPredicted RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 HDHD3Q9BSH5 251 aaPredicted RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TTTY10Q9BZA0 68 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 OR2D2Q9H210 308 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 HMG20AQ9NP66 347 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 COA4Q9NYJ1 87 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 TAS2R8Q9NYW2 309 aa3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 MRPS16Q9Y3D3 137 aaKnown RBP3.65□□□□□ -1.83
VPS35P1-201ENST00000563400 ZFHX4Q86UP3 3567 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 TRBV19A0A075B6N1 114 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 A0A1B0GW64 132 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 TMEM30CPA0ZSE6 113 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 IFITM5A6NNB3 132 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 OOSP1A8MZH6 123 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 C9JQL5 133 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 H7BYZ3 331 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 M0R129 80 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 KALRNO60229 2985 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 GNG7O60262 68 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 FAUP35544 74 aaKnown RBP3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 EDDM3BP56851 147 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 GLIPR1L1Q6UWM5 242 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 IL34Q6ZMJ4 242 aa3.64□□□□□ -1.83
VPS35P1-201ENST00000563400 WDR86Q86TI4 376 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms