RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ZNF331Q9NQX6 463 aaPredicted RBP2.94□□□□□ -1.94
LRRC28-222ENST00000561431 KCNIP2Q9NS61 270 aa2.94□□□□□ -1.94
LRRC28-222ENST00000561431 SCN3BQ9NY72 215 aa2.94□□□□□ -1.94
LRRC28-222ENST00000561431 PXMP4Q9Y6I8 212 aa2.94□□□□□ -1.94
LRRC28-222ENST00000561431 V9GYS6 101 aa2.94□□□□□ -1.94
LRRC28-222ENST00000561431 ZFHX3Q15911 3703 aa2.94□□□□□ -1.94
LRRC28-222ENST00000561431 C2CD3Q4AC94 2353 aa2.94□□□□□ -1.94
LRRC28-222ENST00000561431 FBN1P35555 2871 aaKnown RBP2.94□□□□□ -1.94
LRRC28-222ENST00000561431 ROS1P08922 2347 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 ABCA2Q9BZC7 2435 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 TRAV8-1A0A0A6YYK1 113 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 TRDV1A0A1B0GX56 115 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 F5H5P2 479 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 LYNX1G3V0Z9 82 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 TMEM250H0YL14 139 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 H3BP45 60 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 LY6LH3BQJ8 138 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 M0R233 179 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 DPM2O94777 84 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 NCR2O95944 276 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 CXorf1O96002 111 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 ADRA2AP08913 450 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 LYNX1P0DP58 116 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 BCL2P10415 239 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 IL2RGP31785 369 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 BTCP35070 178 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 MPV17P39210 176 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 RAB5CP51148 216 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 DHRS2Q13268 280 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 HERPUD1Q15011 391 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 GUCA2BQ16661 112 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 C6orf52Q5T4I8 152 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 GLIPR1L1Q6UWM5 242 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 LHFPL1Q86WI0 220 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.93□□□□□ -1.94
LRRC28-222ENST00000561431 OR8D4Q8NGM9 314 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 GTSF1Q8WW33 167 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 PLA2G12AQ9BZM1 189 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 OR2J1Q9GZK6 312 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 BPESC1Q9GZL8 116 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 TMEM133Q9H2Q1 129 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 PARP11Q9NR21 331 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 ANAPC10Q9UM13 185 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 IER3IP1Q9Y5U9 82 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 LHFPL6Q9Y693 200 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 PLCE1Q9P212 2302 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 CADP27708 2225 aa2.93□□□□□ -1.94
LRRC28-222ENST00000561431 USF3Q68DE3 2245 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 H7BYZ3 331 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 I3L521 148 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 RER1O15258 196 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 GPX1P07203 203 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 BRS3P32247 399 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 VDAC2P45880 294 aaPredicted RBP2.92□□□□□ -1.94
LRRC28-222ENST00000561431 NDUFA6P56556 154 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 SMIM11AP58511 58 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 KRTAP10-3P60369 221 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 PCBD1P61457 104 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 SLC38A11Q08AI6 406 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ERCC8Q13216 396 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 RSPO1Q2MKA7 263 aaPredicted RBP2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ZNF404Q494X3 552 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 SPRNQ5BIV9 151 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 C1orf100Q5SVJ3 147 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 AMMECR1LQ6DCA0 310 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ZNF493Q6ZR52 646 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 Q6ZR54 194 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ATP5L2Q7Z4Y8 100 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ZNF664Q8N3J9 261 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 LINC00337Q8N6G1 96 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 LINC00612Q8N6U2 182 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 OR4K13Q8NH42 304 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 SLC25A40Q8TBP6 338 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 KLF14Q8TD94 323 aaPredicted RBP2.92□□□□□ -1.94
LRRC28-222ENST00000561431 PP6455Q8WZ26 134 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ERMAPQ96PL5 475 aaPredicted RBP2.92□□□□□ -1.94
LRRC28-222ENST00000561431 NMNAT3Q96T66 252 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 COMMD5Q9GZQ3 224 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ZNF702PQ9H963 129 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 DYNLRB1Q9NP97 96 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 MED9Q9NWA0 146 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 TAAR3PQ9P1P4 343 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 NAT8Q9UHE5 227 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 LINC00527Q9UJ94 153 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 CUBNO60494 3623 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 TLN2Q9Y4G6 2542 aa2.92□□□□□ -1.94
LRRC28-222ENST00000561431 ARFGEF3Q5TH69 2177 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 IGHV1OR15-1A0A075B7D0 117 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 IGHV1-69-2A0A0G2JMI3 117 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 LOC100130705A0A1B0GUX0 176 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 TCRBV3S1A0A5B6 114 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 ARRDC5A6NEK1 342 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 TMEM212A6NML5 194 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 CD300LBA8K4G0 201 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 H0YJW9 148 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 J3QQQ9 107 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 J3QR89 54 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 J3QRK9 145 aa2.91□□□□□ -1.94
LRRC28-222ENST00000561431 DNASE2O00115 360 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms