RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FOXC2Q99958 501 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 ZZEF1O43149 2961 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 AGRNO00468 2067 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 BMI1P35226 326 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 SEM1Q6ZVN7 128 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 WFDC12Q8WWY7 111 aa12.98□□□□□ -0.33
TPM1-228ENST00000560975 C16orf97H3BN30 126 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 SCGB1A1P11684 91 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 FCER1GP30273 86 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 SHANK2-AS3Q9BTD1 123 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
TPM1-228ENST00000560975 IGLL5B9A064 214 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
TPM1-228ENST00000560975 MC5RP33032 325 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 RAB9AP51151 201 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 INSL3P51460 131 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 CEND1Q8N111 149 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 FAM169BQ8N8A8 192 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 ZNF479Q96JC4 524 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
TPM1-228ENST00000560975 IL4P05112 153 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 ATP5G2Q06055 141 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 PVRIGQ6DKI7 326 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 CCL17Q92583 94 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 ARRDC1-AS1Q9H2J1 176 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 TMEM160Q9NX00 188 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 SIGLEC9Q9Y336 463 aa12.96□□□□□ -0.33
TPM1-228ENST00000560975 J3QR89 54 aa12.96□□□□□ -0.34
TPM1-228ENST00000560975 IGKCP01834 107 aa12.96□□□□□ -0.34
TPM1-228ENST00000560975 Q8TAT8 98 aa12.96□□□□□ -0.34
TPM1-228ENST00000560975 HIGD1BQ9P298 99 aa12.96□□□□□ -0.34
TPM1-228ENST00000560975 TECTAO75443 2155 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 TEX22C9J3V5 150 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
TPM1-228ENST00000560975 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
TPM1-228ENST00000560975 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 MAP1LC3AQ9H492 121 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 SMPXQ9UHP9 88 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 NPIPB5A8MRT5 1133 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 I3L2K1 104 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 E9PLD3 99 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 H3BRN7 92 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 CKS1BP61024 79 aa12.95□□□□□ -0.34
TPM1-228ENST00000560975 TMEM8BA6NDV4 472 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 F8W1H4 67 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 NDUFB3O43676 98 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 PLGLAQ15195 96 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 IGFL4Q6B9Z1 124 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 MAPKAPK5-AS1Q8N8E1 139 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 AAMDCQ9H7C9 122 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 TACC2O95359 2948 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 PPP1R27Q86WC6 154 aa12.94□□□□□ -0.34
TPM1-228ENST00000560975 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
TPM1-228ENST00000560975 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
TPM1-228ENST00000560975 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
TPM1-228ENST00000560975 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
TPM1-228ENST00000560975 RNF125Q96EQ8 232 aa12.93□□□□□ -0.34
TPM1-228ENST00000560975 CSMD1Q96PZ7 3565 aa12.93□□□□□ -0.34
TPM1-228ENST00000560975 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
TPM1-228ENST00000560975 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
TPM1-228ENST00000560975 K7EM74 188 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 NDUFS8O00217 210 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 KLF17Q5JT82 389 aaPredicted RBP12.92□□□□□ -0.34
TPM1-228ENST00000560975 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 PRSS33Q8NF86 280 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 TM2D2Q9BX73 214 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 DPM2O94777 84 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 ORM1P02763 201 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 C12orf74Q32Q52 190 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 SPATA25Q9BR10 227 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 ZMAT4Q9H898 229 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 CTSZQ9UBR2 303 aa12.92□□□□□ -0.34
TPM1-228ENST00000560975 PRRG2O14669 202 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 CNIH1O95406 144 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 GAGE13Q4V321 117 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 MRPS12O15235 138 aaKnown RBP12.91□□□□□ -0.34
TPM1-228ENST00000560975 TNFRSF6BO95407 300 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 CRYGBP07316 175 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 IGHV1-8P0DP01 117 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 LYPD1Q8N2G4 141 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 HIST1H4GQ99525 98 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 CD40P25942 277 aa12.91□□□□□ -0.34
TPM1-228ENST00000560975 MRPL35Q9NZE8 188 aaKnown RBP12.91□□□□□ -0.34
TPM1-228ENST00000560975 LOXP28300 417 aaPredicted RBP12.9□□□□□ -0.34
TPM1-228ENST00000560975 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
TPM1-228ENST00000560975 TRAV26-1A0A087WT03 109 aa12.9□□□□□ -0.34
TPM1-228ENST00000560975 PRSS47A8MTI9 375 aa12.9□□□□□ -0.34
TPM1-228ENST00000560975 K7EIM0 57 aa12.9□□□□□ -0.34
TPM1-228ENST00000560975 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.34
TPM1-228ENST00000560975 PRR25Q96S07 402 aa12.9□□□□□ -0.34
TPM1-228ENST00000560975 A0A1B0GWB2 263 aa12.89□□□□□ -0.35
TPM1-228ENST00000560975 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
TPM1-228ENST00000560975 SVIPQ8NHG7 77 aa12.89□□□□□ -0.35
TPM1-228ENST00000560975 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
TPM1-228ENST00000560975 PCNX1Q96RV3 2341 aa12.89□□□□□ -0.35
TPM1-228ENST00000560975 POLEQ07864 2286 aa12.89□□□□□ -0.35
TPM1-228ENST00000560975 TRAV17A0A0B4J275 112 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms